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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zosma70g00480.1 |
| Common Name | ZOSMA_70G00480 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
LBD |
| Protein Properties |
Length: 262aa MW: 29542.8 Da PI: 9.1441 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma70g00480.1 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 96.6 | 2.5e-30 | 4 | 106 | 1 | 98 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89
+C++C+vlr++Ca+dC+++p++ +++q++ + +++k++G++ +l+l++a+++++r+ +++sl+yeA+ r+ +P+yG vg+++++++ql+q
Zosma70g00480.1 4 SCNGCRVLRKGCAQDCTIRPCLqwietADSQANVTLFLAKFYGRAGLLNLINAAEHHHRPFIFRSLLYEACGRIVNPIYGTVGLLWSGNWQLCQ 97
6*********************9999777889************************************************************** PP
DUF260 90 lkaelallk 98
+++e++l +
Zosma70g00480.1 98 TAVEAVLKG 106
***998876 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 262 aa
Download sequence Send
to blast |
MRMSCNGCRV LRKGCAQDCT IRPCLQWIET ADSQANVTLF LAKFYGRAGL LNLINAAEHH 60
HRPFIFRSLL YEACGRIVNP IYGTVGLLWS GNWQLCQTAV EAVLKGAPVI QIPPETTDET 120
ANPIPMPLLK AFDIRHVSRD HKTQQVDLHK VKVANSTRTR FKRSSKRHVI NNHDNSGNYK 180
PPIFDVHGND RRWMNLYETN KSTAIRSGQP IQTTTEDSKE DNVKLELTIG RCPISPPTDA 240
VSHSTTVDRC IELSMSDYKR F*
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