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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zosma6g01140.1 |
| Common Name | ZOSMA_6G01140 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
GRAS |
| Protein Properties |
Length: 456aa MW: 51240.8 Da PI: 6.2285 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma6g01140.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 379.3 | 4.7e-116 | 71 | 454 | 3 | 373 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdg...dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94
+lLl+cA+ ++++d+++a++lL+ +s++ s + + R+a+ f+ AL+ rl++ +l+ +l+p +++ n ++ + + +++++P+l+f+
Zosma6g01140.1 71 RLLLNCANLIHQSDFTAARRLLSVVSTNTSAQPpelSGADRVAQQFASALSIRLNH--LSLSFSLQPPPSQ-PNPDDLQSCYLSLNKITPFLRFC 162
79*************************95544322489*****************9..3444444444433.236666777778*********** PP
GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl...... 181
hltaNqaIleav++ + +Hi+Dfd ++G+QWp+L++a+a+R+ ++ppslRiTg g + + l++tgerL+ fA++lg++f+f++l
Zosma6g01140.1 163 HLTANQAILEAVDRRQPLHILDFDTMHGVQWPPLMHAIAERAdpNQPPSLRITGTGT----DLDILRRTGERLKTFADTLGLRFQFHPLllippn 253
*****************************************98889***********....9********************************* PP
GRAS 182 .........vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysal 267
a+ ++++++++++++pgE+laVn+vl lh+ll+++++ ++ +++L+++k+++P vv+++e+ea+hns++Fl+rf+eale+y+a+
Zosma6g01140.1 254 rigtgsstlSASCTQNISPSTFQLHPGETLAVNCVLFLHTLLKDNGDDDE-VRSFLQAIKTMNPAVVTIAEREASHNSSRFLQRFMEALEHYAAI 347
***99998667789999*************************99999998.99****************************************** PP
GRAS 268 fdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlg 361
fd+lea+lp+++ er +E+ ++grei ++va eg+ r+erhe++ +W++ ++++ F++vp s +a +qaklllr ++ s+gy+++ ++sl+lg
Zosma6g01140.1 348 FDTLEATLPPNNYERLLLENIWFGREIADIVAGEGRCRQERHERFDRWEHLMKTSDFTSVPSSPFALSQAKLLLRLHYpSEGYQLQMIKDSLFLG 442
*********************************************************************************************** PP
GRAS 362 WkdrpLvsvSaW 373
Wk++pL+svS+W
Zosma6g01140.1 443 WKTNPLFSVSSW 454
************ PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 456 aa
Download sequence Send
to blast |
MLTSFNTSTH EEEDEQETHA NQRTRLDVVC RNRNIDSRHA AAAAAAFVIS QSDRNTQVDV 60
NVDVDEDTSL RLLLNCANLI HQSDFTAARR LLSVVSTNTS AQPPELSGAD RVAQQFASAL 120
SIRLNHLSLS FSLQPPPSQP NPDDLQSCYL SLNKITPFLR FCHLTANQAI LEAVDRRQPL 180
HILDFDTMHG VQWPPLMHAI AERADPNQPP SLRITGTGTD LDILRRTGER LKTFADTLGL 240
RFQFHPLLLI PPNRIGTGSS TLSASCTQNI SPSTFQLHPG ETLAVNCVLF LHTLLKDNGD 300
DDEVRSFLQA IKTMNPAVVT IAEREASHNS SRFLQRFMEA LEHYAAIFDT LEATLPPNNY 360
ERLLLENIWF GREIADIVAG EGRCRQERHE RFDRWEHLMK TSDFTSVPSS PFALSQAKLL 420
LRLHYPSEGY QLQMIKDSLF LGWKTNPLFS VSSWH*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor required for axillary (lateral) shoot meristem formation during vegetative development. Seems to act upstream of REVOLUTA. {ECO:0000269|PubMed:12730136}. |
