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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zosma5g01690.1 |
| Common Name | ZOSMA_5G01690 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
NAC |
| Protein Properties |
Length: 233aa MW: 26898.1 Da PI: 6.3569 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma5g01690.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 138.3 | 4.8e-43 | 5 | 136 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
p GfrF Pt+eelv++yL++k+e++++++e+vi+ v++y++ePw+L++ + ++++++fF++ ++++a+g r++r+t+sgyWkatg+
Zosma5g01690.1 5 PCGFRFYPTEEELVSFYLRHKLENTRNDIERVIPVVEVYSFEPWQLRQvsgepN--IgKSEQCFFFCPMQQREAQGGRPTRTTASGYWKATGTPV 97
89***************************99***************85344332..2356699******************************** PP
NAM 91 evlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127
+v+s+ + +++g+kkt+vfy+g+ap+g kt+W m+ey+
Zosma5g01690.1 98 RVFSSsnTVQVIGIKKTMVFYHGKAPHGMKTEWKMNEYK 136
***98655567***************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 233 aa
Download sequence Send
to blast |
MSNIPCGFRF YPTEEELVSF YLRHKLENTR NDIERVIPVV EVYSFEPWQL RQVSGEPNIG 60
KSEQCFFFCP MQQREAQGGR PTRTTASGYW KATGTPVRVF SSSNTVQVIG IKKTMVFYHG 120
KAPHGMKTEW KMNEYKALRP DQDDANSFRL CNDFSLCRIY IKNGCLRSFD RRPAAATSAN 180
VTQEEHQAQE YIVEQEVDIS QHSIPSSNQG DYDDNFDPFE NMDWKRLFTS LT*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3swm_A | 4e-33 | 3 | 162 | 19 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 4e-33 | 3 | 162 | 19 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 4e-33 | 3 | 162 | 19 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 4e-33 | 3 | 162 | 19 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 4e-33 | 3 | 162 | 19 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 4e-33 | 3 | 162 | 19 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 4e-33 | 3 | 162 | 19 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 4e-33 | 3 | 162 | 19 | 168 | NAC domain-containing protein 19 |
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