PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zosma5g01580.1

Common Name

ZOSMA_5G01580

Organism

Zostera marina

Taxonomic ID

29655

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera

Family

bZIP

Protein Properties

Length: 335aa MW: 37578.9 Da PI: 8.9423

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zosma5g01580.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	19.8	1.8e-06	194	235	18	59
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 18 rrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 +rsR RK+++i+eLe+ v +++ +L+ ++ +l ++ a l Zosma5g01580.1 194 QRSRVRKLQYIAELEQTVNLFQTLEADLAAKVASLFQQRAGL 235 8******************************99998888766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd14703	8.02E-14	188	233	No hit	No description
Gene3D	G3DSA:1.20.5.170	3.3E-6	194	235	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence Send to blast
MSRVAQLPPR IPIRNTVSSD HIANPSSQKG GKPLLPHQKS PSQSSSYFEQ HHQSWVDDHL 60 DDHRTFTNLP PLRRTVSEPV AILEENLSFD FSQFQLDEES SYEAKSCGDH NNLYCGLESN 120 GLYGPNSPRR MENLNHSEST VVSAIFESVN SNAFQYVSAN SPSKFDVNEL NGNGVNFPCV 180 TFEQGRPSKR HTGQRSRVRK LQYIAELEQT VNLFQTLEAD LAAKVASLFQ QRAGLSIENS 240 TLKQKITSLR KEKMMKDGQC QSLKNELKKL NTRFPHLCKS WNTSSTWLPQ EKISKGSSGS 300 GANWQIPDMG GKLNLQEKQP AIPQRHGFRS HDSI*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0K9NU21	0.0	A0A0K9NU21_ZOSMR; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP8137	26	31

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	1e-17	bZIP family protein

Link Out ? help Back to Top
Phytozome	Zosma5g01580.1