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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zosma58g00370.1 |
Common Name | ZOSMA_58G00370 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family |
Trihelix |
Protein Properties |
Length: 223aa MW: 25359.7 Da PI: 9.724 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zosma58g00370.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 30.5 | 9.3e-10 | 13 | 86 | 2 | 75 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtses 75
W+ +e l+L+ ++++ +++ + ++W +s+++ + + r+++qC+ kw++l ++++ik++e++ + ++
Zosma58g00370.1 13 WSLHEKLTLVLEIDAVDDEHGSTISSHQKWNIISNHLIALNICRNSTQCRGKWDSLLSEHRAIKDWESRSRYQT 86
888888888766667777777777999****************************************9975444 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 223 aa
Download sequence Send
to blast |
MSRFTRSQII PDWSLHEKLT LVLEIDAVDD EHGSTISSHQ KWNIISNHLI ALNICRNSTQ 60 CRGKWDSLLS EHRAIKDWES RSRYQTASTS RSNGGDSYWC LESDKRKDLK LPIEFDRELF 120 GLIEGFINKE VIKTKDHKMV VSEIDSPSSS SLPPSSSSSA SSLSGMQDLY SPPPPVSNSL 180 LLTMLVTSSK KANGGRRRRI GRTKLWRCFE RIAVNYRWMW NA*
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT4G31270.1 | 8e-30 | sequence-specific DNA binding transcription factors |