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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zosma53g00110.1 |
| Common Name | ZOSMA_53G00110 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
NAC |
| Protein Properties |
Length: 347aa MW: 38426.7 Da PI: 5.2649 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma53g00110.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 171.8 | 2.1e-53 | 9 | 136 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrFhPtdee+++ yL++k +++++ ++i vd++k+ePwdLp ++ + +ekewy+F++rd+ky+tg+r+nrat++gyWkatgkdke++
Zosma53g00110.1 9 LPPGFRFHPTDEEIISSYLREKFLDRNFNP-RAIGVVDLNKCEPWDLPgRAKNIGEKEWYYFCQRDRKYPTGTRTNRATEAGYWKATGKDKEIF 101
79*************************999.88***************545556999************************************* PP
NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ +++l+g+kktLvfy+grap+gekt+Wv+he+rl
Zosma53g00110.1 102 DGNNNLIGMKKTLVFYRGRAPRGEKTSWVIHEFRL 136
*********************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MARNDLIELP PGFRFHPTDE EIISSYLREK FLDRNFNPRA IGVVDLNKCE PWDLPGRAKN 60
IGEKEWYYFC QRDRKYPTGT RTNRATEAGY WKATGKDKEI FDGNNNLIGM KKTLVFYRGR 120
APRGEKTSWV IHEFRLDNNS YPHPAASRVD RIYDEWVVCR VTHKHADEMT GTNLLSTSAS 180
SSSSSMSLGL PPLMDTCYPN AATHGDHLMS KQSSSSISML NNPPYNNPQY YNLPPNPMNS 240
TFSTGVAEMG GRHPGGGAGE IEGHHEGAIT TPLGGGEVAS KICKEEECST QSLPTSSSTA 300
ISNEMRDIVA PEIGIDRSAF DELDELLSSA GSLGDSLGDM DNFWEW*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-46 | 7 | 166 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-46 | 7 | 166 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-46 | 7 | 166 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-46 | 7 | 166 | 15 | 167 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 1e-46 | 7 | 166 | 15 | 167 | NAC domain-containing protein 19 |
| 4dul_B | 1e-46 | 7 | 166 | 15 | 167 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 249 | 256 | GGRHPGGG |
| Functional Description ? help
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| Source |
Description |
| UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
