PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma48g00230.1
Common NameZOSMA_48G00230
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bZIP
Protein Properties Length: 189aa    MW: 19833.1 Da    PI: 9.6313
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma48g00230.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.21.5e-124291554
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54
                     ++ +r+ +NRe+ArrsR RK++ ++ L + v +L++eN + +++ +  ++
  Zosma48g00230.1 42 RKRKRMVSNRESARRSRMRKQKHLDDLMNQVSQLKKENNQIANTYNITTD 91
                     678999********************************988866655554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-1438102IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.4540103IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-1041116No hitNo description
SuperFamilySSF579591.44E-124293No hitNo description
PfamPF001703.5E-104285IPR004827Basic-leucine zipper domain
CDDcd147029.82E-214393No hitNo description
PROSITE patternPS0003604560IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MGSYGSGGGG GGGSTSGGSS SVVPARSSGG TEEDLQVMMD QRKRKRMVSN RESARRSRMR  60
KQKHLDDLMN QVSQLKKENN QIANTYNITT DQLLAIDAEN SVLRTQMMEL NTRFHSLNEI  120
LGYMNAGATT HTTPSGAASF AHNNGTGVGA GAGTGSIAVA GGGDGFINPW NLISVNQPIM  180
ASPNMFFC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14162RKRKRMVSNRESARRSRMRKQK
25461RRSRMRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00239DAPTransfer from AT1G75390Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002510435.19e-58bZIP transcription factor 11
TrEMBLA0A0K9NZH21e-136A0A0K9NZH2_ZOSMR; Basic-leucine zipper (BZIP) transcription factor family
STRINGXP_002510435.13e-57(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44593367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.17e-37basic leucine-zipper 44