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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zosma462g00010.1 |
| Common Name | ZOSMA_462G00010 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
|
| Family |
NAC |
| Protein Properties |
Length: 326aa MW: 37107.6 Da PI: 9.3079 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma462g00010.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 175 | 2.2e-54 | 15 | 141 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93
lppGfrFhPtdeel+++yLk+k+++++++ ++i++vd++++ePwdLp k+k +ekewyfF rd+ky+tg r+nrat+sgyWk+tgkdke++
Zosma462g00010.1 15 LPPGFRFHPTDEELIMYYLKNKISDSNFTG-RAIADVDLNRCEPWDLPGKAKMGEKEWYFFNLRDRKYPTGVRTNRATSSGYWKTTGKDKEIF 106
79*************************999.89***************99999**************************************** PP
NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyr 127
++ + elvg+kktLvfykgrap+gekt+Wv+heyr
Zosma462g00010.1 107 NTvSMELVGMKKTLVFYKGRAPRGEKTNWVIHEYR 141
9978889***************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MMDEERKKST STENLPPGFR FHPTDEELIM YYLKNKISDS NFTGRAIADV DLNRCEPWDL 60
PGKAKMGEKE WYFFNLRDRK YPTGVRTNRA TSSGYWKTTG KDKEIFNTVS MELVGMKKTL 120
VFYKGRAPRG EKTNWVIHEY RNSLSKFTFK PYKDEWVVCR VFKKNSVRKK YLSNSLDPSD 180
SHRSVVDRID TFMAPQMGNK NNNQGDSYCI NYMVNGTSMT TETRVLRGDS NPSQVTTTMT 240
NPNPLFQQTN FSGALNLNLG ATRAISQQFF AQPQSITMGH CGSILEYSSN NYGHGNDGDS 300
SNNNKIQAAA TMESCMALDS YWSTY*
|
| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-53 | 14 | 170 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-53 | 14 | 170 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-53 | 14 | 170 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-53 | 14 | 170 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 1e-53 | 14 | 170 | 16 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 1e-53 | 14 | 170 | 16 | 171 | NAC domain-containing protein 19 |
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