PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma44g00460.1
Common NameZOSMA_44G00460
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bZIP
Protein Properties Length: 476aa    MW: 52033.4 Da    PI: 8.1245
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma44g00460.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.44.1e-10188228545
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                      k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Zosma44g00460.1 188 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLSQLEQEL 228
                      788*************************9877777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.4E-9184247IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.427186230IPR004827Basic-leucine zipper domain
CDDcd147083.39E-22188240No hitNo description
PfamPF001703.5E-7188228IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-7188231No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-7189232No hitNo description
PROSITE patternPS000360191206IPR004827Basic-leucine zipper domain
PfamPF141442.8E-30270345IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    Send to blast
MGSRKGGVGL EDGKKLVAGM PSLIPHSTIS NPIDSGKNID MHSSRTSDFG SLEQQQQSIG  60
FHLENAAILS RNPPVFVQKP SALAAGSSAP LQFGTFNKTV FNSIGGIVSQ ATQEKGQQQP  120
PNLVSLSSGA VNYENWGESL MADTSPRTDT STDLDPDDKN QMLEGGHVSN LAASDCSDRS  180
KERAGDQKTL RRLAQNREAA RKSRLRKKAY VQQLESSRLK LSQLEQELQR ARQQGIFISS  240
SGDQSHSTAG NGALAFDMEY ARWVEDQNRQ INELRGGVNS HASDNELRIM VESVMAHWDD  300
IFKLKGVAAK TDVFHMLSGM WKTPAERCFL WLGGFRSSEL LKLLANQLEP LTEQQLLGIC  360
NLQQSSQQAE DALSQGMEAL QQSLAETLAS GSLGPSSSGS SGNVANYMGQ MAMAMGKLGT  420
LENFLRQADN LRQQTLQQMH RILTTRQAAR ALLAIHDYFS RLRALSSLWL ARPRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019701724.20.0transcription factor TGA2.3
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A0K9P0T20.0A0A0K9P0T2_ZOSMR; Transcription factor HBP-1b(C1)
STRINGVIT_13s0084g00660.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-142TGACG motif-binding factor 6