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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zosma400g00040.1 |
| Common Name | ZOSMA_400G00040 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
WRKY |
| Protein Properties |
Length: 347aa MW: 37865.7 Da PI: 5.2711 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma400g00040.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 105.4 | 2.9e-33 | 161 | 218 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s+fprsYYrCt C vkk+vers++dp++v++tYeg+H+h
Zosma400g00040.1 161 EDGYRWRKYGQKAVKNSPFPRSYYRCTNLMCGVKKRVERSSSDPTIVVTTYEGQHTHA 218
8********************************************************6 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MMMAKRDEVE LENREKIQIT GSSFVGGIGG GGPGERGFLD EVDSKSSFLD LLRCGGSEAQ 60
VQQPLVSSHA PPARPVVASP PPDSTSVSSS SVEASGSTTC ADQAKSAVTD EDEEEEDEDG 120
GGKNNTLKRT AAKMKSKKVQ KKREREPRFA FMTKSEVDHL EDGYRWRKYG QKAVKNSPFP 180
RSYYRCTNLM CGVKKRVERS SSDPTIVVTT YEGQHTHANP AVSRGGQAIC AASLSSPFSS 240
SAPLLNPTQQ FHYPYSLLPH HNQLDTPLYS PMTVPLPQMD DFTWFDSTAD TTFDAIAGAN 300
YDPVSNYNNN DDNNNNNYTH GSLLGGDDGL LQDLVPSDVR REDRKV*
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