PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma323g00060.1
Common NameZOSMA_323G00060
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family Dof
Protein Properties Length: 259aa    MW: 28124.2 Da    PI: 9.4207
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma323g00060.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof112.91.4e-352075459
            zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59
                      ++ +cprC+s++tkfCyynny+l+qPr+fCk+CrryWt GG++rn+PvGg++r+n 
  Zosma323g00060.1 20 EHPRCPRCNSQETKFCYYNNYNLAQPRHFCKSCRRYWTLGGTIRNIPVGGTSRRNY 75
                      5678*************************************************996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088427.412276IPR003851Zinc finger, Dof-type
PfamPF027011.5E-302274IPR003851Zinc finger, Dof-type
PROSITE patternPS0136102460IPR003851Zinc finger, Dof-type
ProDomPD0074781.0E-202473IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    Send to blast
MASGFITRRL TPTPPPSSSE HPRCPRCNSQ ETKFCYYNNY NLAQPRHFCK SCRRYWTLGG  60
TIRNIPVGGT SRRNYLTASA SSTSSYSSSG ISKRRKSDRP TSNNSSSTAS SSSKMVLVDV  120
HHHGVVHTSP QPISVVAPGN EEHFVPRTFG GLLTEPIPSG FRLGLGIEET GFSQGRTPWS  180
FFGEETFFNH VGVGVSIGRQ PPPPPQQQQT QHQMVGGGIG DYGSDLFFDA WPISGGYGGG  240
HFTWPDVTVD TTPAKKIE*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9PB130.0A0A0K9PB13_ZOSMR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP14037367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21270.11e-26DOF zinc finger protein 2