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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zosma31g01570.1 |
Common Name | ZOSMA_31G01570 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family |
Trihelix |
Protein Properties |
Length: 101aa MW: 11769.2 Da PI: 9.2316 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zosma31g01570.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 25.3 | 4.1e-08 | 6 | 70 | 11 | 75 |
trihelix 11 iearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtses 75
+e+ ++r +++ ++ ++W +++++ + + r++ C+ kw++l ++ ik++e++ + ++
Zosma31g01570.1 6 LEINVVYDKRGSSTISAHQKWNIIGDHLIALNICRNSSHCRRKWDSLTSEHYTIKDWESRSRYQT 70
56666677888888899*****************************************9975444 PP
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT4G31270.1 | 2e-17 | sequence-specific DNA binding transcription factors |