PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma31g01570.1 | ||||||||
Common Name | ZOSMA_31G01570 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | Trihelix | ||||||||
Protein Properties | Length: 101aa MW: 11769.2 Da PI: 9.2316 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 25.3 | 4.1e-08 | 6 | 70 | 11 | 75 |
trihelix 11 iearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtses 75 +e+ ++r +++ ++ ++W +++++ + + r++ C+ kw++l ++ ik++e++ + ++ Zosma31g01570.1 6 LEINVVYDKRGSSTISAHQKWNIIGDHLIALNICRNSSHCRRKWDSLTSEHYTIKDWESRSRYQT 70 56666677888888899*****************************************9975444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 101 aa Download sequence Send to blast |
MLTFVLEINV VYDKRGSSTI SAHQKWNIIG DHLIALNICR NSSHCRRKWD SLTSEHYTIK 60 DWESRSRYQT ASTSRSNGGN SYWCLESDKR KDLKLRIEFD * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0K9PBJ1 | 3e-67 | A0A0K9PBJ1_ZOSMR; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6353 | 24 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31270.1 | 2e-17 | sequence-specific DNA binding transcription factors |
Link Out ? help Back to Top | |
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Phytozome | Zosma31g01570.1 |