PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zosma317g00080.1

Common Name

ZOSMA_317G00080

Organism

Zostera marina

Taxonomic ID

29655

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera

Family

bZIP

Protein Properties

Length: 272aa MW: 30356.5 Da PI: 5.1329

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zosma317g00080.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35	3.1e-11	155	210	5	60
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 kr +r NR +A+rsR RK+++i eLe+ v L++e +aL ++ l+ + ++l Zosma317g00080.1 155 KRVKRILANRQSAQRSRVRKLQYISELERSVTYLQTEVSALSPQVAFLEHQRSALN 210 899**************************************999988888877775 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.7E-15	151	215	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.14	153	216	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.9E-10	155	210	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.1E-12	155	210	No hit	No description
SuperFamily	SSF57959	3.52E-12	155	209	No hit	No description
CDD	cd14703	6.70E-24	156	206	No hit	No description
PROSITE pattern	PS00036	0	158	173	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence Send to blast
MAQLPPKIPN MPSSNFNSFV FANQKNTASC LPTDTVADQQ TWVDDFLDLY TSGKRQSSSS 60 NPSDPDYNYD DQVGTMSTEF HQMKDNQMMS MFMDVDVPQL PSSSLISDLH NVAASTPSDH 120 NSNSNDDEDE DEQIQSDAPT NTVKPAAQNT ITDPKRVKRI LANRQSAQRS RVRKLQYISE 180 LERSVTYLQT EVSALSPQVA FLEHQRSALN TGNNALRQRI AILAQDKVFK EAHQEALKKE 240 IERLSQMYQV QQNSTGTGTG TRSNVKYPTT T*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010260405.1	3e-73	PREDICTED: basic leucine zipper 61-like
Swissprot	Q9M2K4	5e-59	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A0K9PBG5	0.0	A0A0K9PBG5_ZOSMR; BZIP transcription factor family protein
STRING	XP_010260405.1	1e-72	(Nelumbo nucifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1322	38	125

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	1e-57	bZIP family protein

Link Out ? help Back to Top
Phytozome	Zosma317g00080.1

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]