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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zosma310g00040.1 |
| Common Name | ZOSMA_310G00040 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
LBD |
| Protein Properties |
Length: 205aa MW: 22472.7 Da PI: 4.7787 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma310g00040.1 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 98.5 | 6.9e-31 | 2 | 101 | 1 | 95 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88
+C++C+vlr++C ++C+l+p++ p++q +++ +v+k+FG++ ++k+++++pe+er+++++sl++eA+ r +Pv+Gavg+++++++ ++
Zosma310g00040.1 2 SCNGCRVLRKGCGEKCILRPCLqwienPDAQGHATVFVAKFFGRAGLMKFISSVPETERPAIFQSLLFEACGRSVNPVNGAVGLLWSGKWSIC 94
6**************************9***************************************************************** PP
DUF260 89 qlkaela 95
q+++e+
Zosma310g00040.1 95 QSAVETI 101
**99875 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 205 aa
Download sequence Send
to blast |
MSCNGCRVLR KGCGEKCILR PCLQWIENPD AQGHATVFVA KFFGRAGLMK FISSVPETER 60
PAIFQSLLFE ACGRSVNPVN GAVGLLWSGK WSICQSAVET ILRGGTLQPL TDLHDEMSDA 120
AEIYSQKRVN RNRMSTVDDA VEKTWMVDAF DLDLCLSPTP AYMSAYTRHR GVCLEEEEGE 180
EEGSVTTSSG SGEIVQPMLL NLFI*
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