 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zosma30g00060.1 |
| Common Name | ZOSMA_30G00060 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
|
| Family |
G2-like |
| Protein Properties |
Length: 416aa MW: 45079 Da PI: 5.6462 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma30g00060.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 100.7 | 9.4e-32 | 218 | 273 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+p+LH+rFv+a++ LGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
Zosma30g00060.1 218 KARRCWSPDLHRRFVNALQVLGGSQVATPKQIRELMKVEGLTNDEVKSHLQKYRLH 273
68****************************************************97 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009266 | Biological Process | response to temperature stimulus |
| GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
| GO:0010452 | Biological Process | histone H3-K36 methylation |
| GO:0048579 | Biological Process | negative regulation of long-day photoperiodism, flowering |
| GO:1903507 | Biological Process | negative regulation of nucleic acid-templated transcription |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 416 aa
Download sequence Send
to blast |
MGSNELSLDY KPNVDITLST TSEADQPDPT HKLKQFLARL EQERLKIDVF KKELPLCMQL 60
LNNAMEVYRQ QLEEGGEKMA VTEEFLPAVV KKNCTGDDKS DNSEPLEKAN WLASVQLWTQ 120
SNNEVPSSPK RWNTGGAFLP FSKEKTVDKA SGCSDLALAP VEDNRPSVLE TIEESRDDRC 180
DNNISTTPNM ENSGGGGGGG QTAAGMGSSG GQNQTHRKAR RCWSPDLHRR FVNALQVLGG 240
SQVATPKQIR ELMKVEGLTN DEVKSHLQKY RLHTRPLPAP AQHAVASGHP KLVVLGGIWV 300
PPEYATSATV YSTHPSSATQ FCTTAATPLS RGFYSSPTAP QPPQASNAHS HCSVTRHRCG 360
LQGTVELDKK GNREETSEST EEEIKEEVEA ERKSGTSCSN GAGGGEEDSN GSDMC*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 1e-14 | 218 | 271 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-14 | 218 | 271 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-14 | 218 | 271 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-14 | 218 | 271 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor acting as a flowering repressor, directly repressing FT expression in a dosage-dependent manner in the leaf vasculature. {ECO:0000269|PubMed:25132385}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Up-regulated by SVP. Down-regulated by high temperature and gibberellic acid treatment. Not regulated by photoperiod, circadian rhythm under long days or vernalization. {ECO:0000269|PubMed:25132385}. |
