 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zosma2g01930.1 |
| Common Name | ZOSMA_2G01930 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
|
| Family |
Trihelix |
| Protein Properties |
Length: 310aa MW: 34385.1 Da PI: 10.1279 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma2g01930.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 46.6 | 9.1e-15 | 23 | 113 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
+W++ + +Li+a e+ +l rg+l++++Weev++ + r +r+ +qCk++++ ++k++k +k + ++ + +s++p++d+l+a
Zosma2g01930.1 23 CWSEGATSVLIDAWGERFLDLTRGNLRQKHWEEVADTVnsrktVVRRPHRTDVQCKNRIDTIKKKFKVEKGRVVNE-GGFESQWPFYDRLDA 113
7*************************************76554444458999***************999998885.78999*******985 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 310 aa
Download sequence Send
to blast |
MEGKIESGRP PPPNPAMPYR EDCWSEGATS VLIDAWGERF LDLTRGNLRQ KHWEEVADTV 60
NSRKTVVRRP HRTDVQCKNR IDTIKKKFKV EKGRVVNEGG FESQWPFYDR LDALIGNCPP 120
PPLPSSSSAK KKKKKRTEKT LVNDPSHKPL PLALSPPPVS CKRPASEPSL KWGRFSAAAA 180
AAAAARDDDP DSEASSSTGG YAHKEARSYV RKNGGFGRGI GEETMNGNGN ENGSANGNGI 240
MELAMAINKM GEIYEKVEMS RQKQEIEIEK ERLAFNKDME LRKMNLLIKA HVEMRKIKRA 300
KLNSVEGSS*
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT3G14180.1 | 7e-39 | sequence-specific DNA binding transcription factors |
