PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma2g01320.1
Common NameZOSMA_2G01320
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family CAMTA
Protein Properties Length: 912aa    MW: 103351 Da    PI: 7.3938
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma2g01320.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1156.94.3e-49121263117
            CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 
                     ke + rwlk+ e+++iL+n+ek+++t++ + +p+sgsl+L+n++++r+frkDG+ w+k k+gk+v+E+hekLK++++e+l++yYa++e+np fqr
  Zosma2g01320.1  12 KEaRYRWLKPIEVLSILQNYEKFQITQKVEVKPPSGSLFLFNKRVLRFFRKDGHLWQK-KNGKAVNEAHEKLKIKNIETLNVYYARGEINPRFQR 105
                     56699***************************************************86.79********************************** PP

            CG-1  97 rcywlLeeelekivlvhylev 117
                     rcyw+L+ ++ +ivlvhyl+v
  Zosma2g01320.1 106 RCYWMLDPNRGHIVLVHYLDV 126
                     ******************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143765.2687132IPR005559CG-1 DNA-binding domain
SMARTSM010762.6E-6510127IPR005559CG-1 DNA-binding domain
PfamPF038593.2E-4313126IPR005559CG-1 DNA-binding domain
SuperFamilySSF812961.0E-10344424IPR014756Immunoglobulin E-set
PfamPF018334.3E-4344424IPR002909IPT domain
Gene3DG3DSA:1.25.40.201.4E-12532631IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484039.79E-14533629IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029714.743533625IPR020683Ankyrin repeat-containing domain
CDDcd002044.08E-6538625No hitNo description
SMARTSM002480.048566595IPR002110Ankyrin repeat
PROSITE profilePS5008810.553566598IPR002110Ankyrin repeat
SMARTSM002481200605634IPR002110Ankyrin repeat
SMARTSM0001512674696IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.309675703IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525409.03E-7678779IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.018731753IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.986732761IPR000048IQ motif, EF-hand binding site
PfamPF006120.0024734752IPR000048IQ motif, EF-hand binding site
SMARTSM000151.2E-4754776IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.706755780IPR000048IQ motif, EF-hand binding site
PfamPF006127.1E-5756776IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 912 aa     Download sequence    Send to blast
MESGLDINKL FKEARYRWLK PIEVLSILQN YEKFQITQKV EVKPPSGSLF LFNKRVLRFF  60
RKDGHLWQKK NGKAVNEAHE KLKIKNIETL NVYYARGEIN PRFQRRCYWM LDPNRGHIVL  120
VHYLDVEERQ NSESNMSIDT SSFFNQLNRV SNPGSGVVIQ DSSSVGEVDS EYAMNNNDMN  180
NTCLEKGLGN HSKVSNSEIN KALRKLTAQL SLGDDEGSPD NLICIDDPPR YSKELNGLGF  240
SNNGVNFPQD QLESLMNELS YSGREDEVAS HNMNAENMDL LGNNGIHDLI HSLQSEDNLQ  300
LHLSETMKFL LDSNESSSAM EPQRYQQHVH SKPLGEEQLF KFKEVTPEFA FSSQSSKVII  360
MGEFLCDPSE YSWAAMFDDT EVPLETIQEG IFSCRTPQHV PGRVKLCITS GNSKSCSEIR  420
EFEYFIGPNT SYHKSNFSRE ISNKNTELLF LVKFVQTLLE KEDEVFQTKS GTKGSNKNSV  480
DWQEIINSLL FGNVNKSDVS DWILLKLLKN KLRCWISTKC QNNQMGDCSL SKKDKGIIHF  540
ISALGYEWAL NPILGLGVGI NFRDINGWTG LHWAAKFGRE KMVASLLAAG ASAGAVTDPS  600
KEDPNGKPPA SIAAMNGHQG LAGYLSEVAL NTHLSFLTEG ESNASKTATA VKDERDTEEG  660
YDLTLKHSLA AVRDATLAAA QIQSAFRAHS FRKKQQKVPP SMRFDEHNLF TSEEILSLSD  720
ASRHQRYPHG EKLQAALCIQ KKFRGWKGRK KFLNIRRKVV KIQAHFRGHR MRKKYKLLWT  780
VGVVEKVILR WRRRGVGLRG FRSEFENNNG MEEPDILKMF RKQKVDLALN EAVSSVVSMS  840
KSAEARQQYH RMLQCYHKAK VELENMGQPD STAGNGLLLR EEEGAEDMNE LVPDENFTWE  900
SLLLENIEST V*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9PD520.0A0A0K9PD52_ZOSMR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP94073440
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.11e-125Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains