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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zosma279g00090.1 |
| Common Name | ZOSMA_279G00090 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
NAC |
| Protein Properties |
Length: 239aa MW: 27571.1 Da PI: 5.6222 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma279g00090.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 176.2 | 9.1e-55 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeelv++yLk+k++g k+el ++i+evd+yk+ePw+L k + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++
Zosma279g00090.1 6 LPPGFRFHPTDEELVHYYLKRKIHGLKIEL-DIIPEVDLYKCEPWELSdKsFLPSKDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRR 97
79****************************.99**************85335556788*********************************** PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
v s +++++g+kktLv+y+grap+g +tdWvmheyrl
Zosma279g00090.1 98 VSS-QNRVIGMKKTLVYYRGRAPQGIRTDWVMHEYRL 133
**9.999****************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 239 aa
Download sequence Send
to blast |
MSPVGLPPGF RFHPTDEELV HYYLKRKIHG LKIELDIIPE VDLYKCEPWE LSDKSFLPSK 60
DPEWYFFGPR DRKYPNGFRT NRATRAGYWK STGKDRRVSS QNRVIGMKKT LVYYRGRAPQ 120
GIRTDWVMHE YRLDDKECED TMGIQDSFAL CRVFKKNVVT PNIQQLEDHS SHPDQLPLAD 180
QQLPIIDVGA QTLSPNMQPA QSPSCVDEED DSWMQFITDD AWCSAVSTNE PDLSFSLH*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3swm_A | 4e-54 | 1 | 157 | 15 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 4e-54 | 1 | 157 | 15 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 4e-54 | 1 | 157 | 15 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 4e-54 | 1 | 157 | 15 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 4e-54 | 1 | 157 | 15 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 4e-54 | 1 | 157 | 15 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 4e-54 | 1 | 157 | 15 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 4e-54 | 1 | 157 | 15 | 169 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor directing sieve element enucleation and cytosol degradation. Not required for formation of lytic vacuoles. Regulates, with NAC086, the transcription of NEN1, NEN2, NEN3, NEN4, RTM1, RTM2, UBP16, PLDZETA, ABCB10 and At1g26450. {ECO:0000269|PubMed:25081480}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Regulated by the transcription factor APL (AC Q9SAK5). {ECO:0000269|PubMed:25081480}. |
