PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma26g01050.1
Common NameZOSMA_26G01050
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bZIP
Protein Properties Length: 422aa    MW: 45274.4 Da    PI: 5.5684
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma26g01050.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.98e-22309371163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      e+e+kr++rkq+NRe+ArrsR+RK+ae+e L+++v++L++eNka k+el++++ e++kl s++
  Zosma26g01050.1 309 EREIKRQKRKQSNRESARRSRLRKQAECEDLAQRVEVLKEENKAIKEELNRITREYEKLISDN 371
                      89*********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.3E-28195IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.0E-38135268No hitNo description
Gene3DG3DSA:1.20.5.1703.4E-18303367No hitNo description
SMARTSM003381.7E-21309373IPR004827Basic-leucine zipper domain
PfamPF001705.6E-20309371IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.806311374IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.25E-11312368No hitNo description
CDDcd147022.03E-24314364No hitNo description
PROSITE patternPS000360316331IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 422 aa     Download sequence    Send to blast
MGNSDPDAST VNTSSAQEQP PTSAASPATI YPDWSGFQAY SPIPPHGFFP SPVATSPQTH  60
PYMWGAQHMM PPYGTPPPPY VMYPHGGLYA HHPSLPPGTH PFSPYAMPSP NGNVEASVVV  120
TGGTEVDGKP SEAKEKLPVK RSKGSLGSLN MITGKNNNEH GKSGAPANGV FSQSGEGESG  180
SEDSSEGSDD NSQNDSQAKS GGQDALEVDQ TQNGGAARIS QNGVSRAHSQ PILNQPMSVI  240
PVQTAGAHAV SGPTTSLNIG RDYWGAHNQP PMASVRGEIA GAPGVGTMVP SCVTGPRENI  300
PSDLWMQDER EIKRQKRKQS NRESARRSRL RKQAECEDLA QRVEVLKEEN KAIKEELNRI  360
TREYEKLISD NTSLKEQYDT RRGNDDSGVE KTEQHSGAVN HEKHNEFDVT EGNTDTFQND  420
S*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325331RRSRLRK
2325332RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019705679.11e-168bZIP transcription factor 16 isoform X3
SwissprotQ501B21e-128BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A0K9PGK40.0A0A0K9PGK4_ZOSMR; G-box-binding factor
STRINGXP_008788461.11e-167(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.18e-99basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]