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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zosma265g00020.1 |
| Common Name | ZOSMA_265G00020 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
NAC |
| Protein Properties |
Length: 356aa MW: 41275.1 Da PI: 6.4289 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma265g00020.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 175.9 | 1.2e-54 | 7 | 136 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkd 89
+ppGfrFhPtdeelv++yL+kk++++k++l +vike+d+yk+ePwdL+ + ++ + eekewyfFs++dkky+tg+r+nrat++g+Wkatg+d
Zosma265g00020.1 7 VPPGFRFHPTDEELVDYYLRKKLAARKIDL-DVIKEIDLYKIEPWDLQeEkcRIGTeEEKEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRD 98
69****************************.9***************8435533333667********************************* PP
NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
k+++s k++lvg++ktLv+ykgrap+g+k+dW++heyr+
Zosma265g00020.1 99 KPIYS-KRNLVGMRKTLVYYKGRAPNGQKSDWIIHEYRV 136
*****.899****************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0048759 | Biological Process | xylem vessel member cell differentiation |
| GO:1901348 | Biological Process | positive regulation of secondary cell wall biogenesis |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MNAFSHVPPG FRFHPTDEEL VDYYLRKKLA ARKIDLDVIK EIDLYKIEPW DLQEEKCRIG 60
TEEEKEWYFF SHKDKKYPTG TRTNRATTAG FWKATGRDKP IYSKRNLVGM RKTLVYYKGR 120
APNGQKSDWI IHEYRVQTDI NGNPQEEGWV VCRIFRKRMA MVQRNYQEPT CWNIEERISL 180
NSNIIPDLES SESNKHNLHR PNYNMNNSCN FKKETDQLRV QPLNFQDQLG SYVNIQENNT 240
PLVHLQNPSY PLVAQEEAIL LQPDNLYHLL QQQHPSMVNS SLSSSSSSRN IDDNVTDWRL 300
LDRFVASQLS QDDDQILDGR GNLSNSINAV DDELGRALSD LASTSASTCQ IDLWK*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3', in the promoter of target genes (By similarity). Involved in xylem formation by promoting the expression of secondary wall-associated transcription factors and of genes involved in secondary wall biosynthesis and programmed cell death, genes driven by the secondary wall NAC binding element (SNBE). Triggers thickening of secondary walls (PubMed:16103214, PubMed:25148240). {ECO:0000250|UniProtKB:Q9LVA1, ECO:0000269|PubMed:16103214, ECO:0000269|PubMed:25148240}. |
