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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zosma250g00090.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
NAC |
| Protein Properties |
Length: 158aa MW: 18161.3 Da PI: 4.2713 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma250g00090.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 53.1 | 1e-16 | 11 | 60 | 2 | 51 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkkv 51
pGfrFhPt+eelv +yL++kv +++ +++ evi+++d+y++ePwdL+ v
Zosma250g00090.1 11 LPGFRFHPTEEELVGYYLTRKVCSSQeIDV-EVITDIDLYRIEPWDLQGFV 60
69*******************887774777.99**************8433 PP
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| 2 | NAM | 54.1 | 5.2e-17 | 74 | 123 | 2 | 50 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk.k 50
pGfrFhPt+eelv +yL++kv +++ +++ evi+++d+y++ePwdL++ +
Zosma250g00090.1 74 LPGFRFHPTEEELVGYYLTRKVCSSQeIDV-EVITDIDLYRIEPWDLQAtR 123
69*******************887774777.99**************8422 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 158 aa
Download sequence Send
to blast |
MEVESSSLGV LPGFRFHPTE EELVGYYLTR KVCSSQEIDV EVITDIDLYR IEPWDLQGFV 60
SAHMEVESSS LGVLPGFRFH PTEEELVGYY LTRKVCSSQE IDVEVITDID LYRIEPWDLQ 120
ATRTRSIRPE QEPTEQQTLG FGKRQGETRL WSLRTES*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator that binds to the secondary wall NAC binding element (SNBE), 5'-(T/A)NN(C/T)(T/C/G)TNNNNNNNA(A/C)GN(A/C/T)(A/T)-3', in the promoter of target genes (By similarity). Involved in xylem formation by promoting the expression of secondary wall-associated transcription factors and of genes involved in secondary wall biosynthesis and programmed cell death, genes driven by the secondary wall NAC binding element (SNBE). Triggers thickening of secondary walls (PubMed:25148240). {ECO:0000250|UniProtKB:Q9LVA1, ECO:0000269|PubMed:25148240}. |
