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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zosma23g01260.1 |
Common Name | ZOSMA_23G01260 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family |
HD-ZIP |
Protein Properties |
Length: 329aa MW: 37856.7 Da PI: 4.6108 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zosma23g01260.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 58.3 | 1.3e-18 | 58 | 111 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq+++Le+ Fe ++++ e++ +LA+ lgL+ rqV vWFqNrRa++k
Zosma23g01260.1 58 KKRRLSVEQVKTLEKNFEVENKLEPERKVKLAQDLGLQPRQVAVWFQNRRARWK 111
456899***********************************************9 PP
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2 | HD-ZIP_I/II | 129.2 | 1.7e-41 | 57 | 149 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
ekkrrls eqvk+LE++Fe e+kLeperKv+la++LglqprqvavWFqnrRAR+ktkqlE+dy +Lk++yd++k++ ++L +e+++L +elke
Zosma23g01260.1 57 EKKRRLSVEQVKTLEKNFEVENKLEPERKVKLAQDLGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDTIKNNYDKLVQEKDHLLAELKE 149
69***************************************************************************************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009737 | Biological Process | response to abscisic acid |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MKRPRNSNSL SSEDTTTVGS FQSILDGLGE EEEDEMMLIM GDDAAIGVGT TSLNSVEKKR 60 RLSVEQVKTL EKNFEVENKL EPERKVKLAQ DLGLQPRQVA VWFQNRRARW KTKQLERDYG 120 VLKANYDTIK NNYDKLVQEK DHLLAELKEL KTKLDGKNSH CLIKEEIVAH EDEYDVKVNK 180 DEMNLHRRSK DVDENENDED DAEKHILAVL YNYKDGLSDS DSSAILNDLS SHSDEGLPNK 240 IHNYDHDEEQ KQLLLADFNY TSSSSTCSQF PHHTVGNGRD DGLSYYHYQL PAHQYQQILP 300 KMEENTFLNG NEFFSDDPSP ELLSNWWE*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 105 | 113 | RRARWKTKQ |