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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zosma220g00160.1 |
| Common Name | ZOSMA_220G00160 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
TCP |
| Protein Properties |
Length: 284aa MW: 31413.2 Da PI: 9.2933 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma220g00160.1 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 122.4 | 5e-38 | 64 | 212 | 2 | 136 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................ssssaseceaess 78
+++d+h ki+T++g+RdRR+Rls ++a +fFdLqd LGfd++s+t++WLl+++k ai l + ++ e++
Zosma220g00160.1 64 NKRRDSHRKISTAQGLRDRRMRLSQDVAQKFFDLQDVLGFDRPSETVDWLLTKSKYAIESLSTPcpfpcpcspcggsrsqT--TKAESS---- 150
579**********************************************************88876666655554433221..111111.... PP
TCP 79 sssasnsssg.............kaaksaakskksqksaasalnlakesrakarararertrekmriknkl 136
+ ++s + +++ +++ l+ke rakar+rar+rt+ek ++k+++
Zosma220g00160.1 151 ---------TsecevkgprksstTVRRSPRVNGTRKSIVSANPVLQKELRAKARERARKRTTEKGMLKTST 212
.........122333344443434444444555555556667999*******************9998765 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 284 aa
Download sequence Send
to blast |
MFSSRWLQTS SSSSQNPTQL FPTFDPSDGF NDLFNVIRLA PGDNGNDPVL IPCTGAGKRT 60
PEANKRRDSH RKISTAQGLR DRRMRLSQDV AQKFFDLQDV LGFDRPSETV DWLLTKSKYA 120
IESLSTPCPF PCPCSPCGGS RSQTTKAESS TSECEVKGPR KSSTTVRRSP RVNGTRKSIV 180
SANPVLQKEL RAKARERARK RTTEKGMLKT STATRVEEDQ TLLLEHYGDP SLEMMITSML 240
NNGSSLGYTT TASTSASNNT TNINVDSINL CQEYYPNLLP QWD*
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