PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma21g00230.1
Common NameZOSMA_21G00230
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family MYB_related
Protein Properties Length: 764aa    MW: 85537.2 Da    PI: 6.946
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma21g00230.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.21.8e-084890347
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +WT +E+e + +a +q G++ +++I  +++  +   q++++++ +
  Zosma21g00230.1 48 AWTRQEEENFFNALRQVGKN-FEKITGRVQ-SKNKDQVRHYYYRL 90
                     6*****************99.*********.***********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.2E-104095IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.3E-54393IPR009057Homeodomain-like
PROSITE profilePS5129312.7974495IPR017884SANT domain
SMARTSM007173.3E-64593IPR001005SANT/Myb domain
CDDcd001671.13E-54891No hitNo description
PfamPF002493.5E-64890IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016310Biological Processphosphorylation
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0016301Molecular Functionkinase activity
Sequence ? help Back to Top
Protein Sequence    Length: 764 aa     Download sequence    Send to blast
MGSLPKESIK ISIPHEKLTV KDGDTSFPSS LVSDLQKPAK KPTRQWAAWT RQEEENFFNA  60
LRQVGKNFEK ITGRVQSKNK DQVRHYYYRL VRRMNKLLGP GFDLDAKNSK DTISAMLRWW  120
SLLEKYSCTA SKLHLKPRRF KIFIEALAHQ LLKDRNKTRR KQAANEETYS FIPSIPASNT  180
SKESGNEITP VKLLLLDNQK NQKLGFTKRS SLKGSINADI NCSRGGFSIG GKSIKQNRRT  240
GLIASTAYKR WEKAAVAGVS LVADAAEQLE KTDDMINSSK HASFNIQSLE HRDNVGCTVH  300
PMPSSPLGDI CSSHLSGGCV QAFSKLKLQL FPVDDVARKI LEKDDYNPHL ELTLSVRKRI  360
SSILEHLNRK WEKSRTALGE LTLLPYDVQV SDLMNCQKWT LIDKDARADD VYRAVGRPDI  420
FRLRYGWLSN SVLESQNLQS PPASFHFASD LQFKECAQNV DSVDPERFTK VGDGHQSDNF  480
FDSPNVVPET ELANISLKSK NLHGESLQQN ISQKESENEK KQQSDEENLV SNKIPKLSAF  540
EWADTLTNIS IGDLLSEASK GMDSMSNYRP VDANMTTPGQ IIPFSCDSFD AAIAAHLSGC  600
KDLENTSNRI SQSSVWEAED TCDEFSFKKI REDRNIPCTS DGLGSPIINT DSTGFRDLFK  660
NVSETEPKEV FSQETHEIQN HLGLGDIFWP DSMAAFDLDI QSFPRYLDQD MILGDSLNGL  720
SRLIANSLDA FQNLSFSGLE RKTPSAAESE EVASPSSIIK GEK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010923251.10.0TSL-kinase interacting protein 1
RefseqXP_019705927.10.0TSL-kinase interacting protein 1
RefseqXP_019705942.10.0TSL-kinase interacting protein 1
RefseqXP_019705958.10.0TSL-kinase interacting protein 1
RefseqXP_019705966.10.0TSL-kinase interacting protein 1
RefseqXP_019705975.10.0TSL-kinase interacting protein 1
RefseqXP_019705993.10.0TSL-kinase interacting protein 1
RefseqXP_029121969.10.0TSL-kinase interacting protein 1
TrEMBLA0A0K9PJP00.0A0A0K9PJP0_ZOSMR; TSL-kinase interacting protein 1
STRINGXP_008791198.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54783643
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.11e-164TSL-kinase interacting protein 1