PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma208g00360.1 | ||||||||
Common Name | ZOSMA_208G00360 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | BES1 | ||||||||
Protein Properties | Length: 159aa MW: 18166.6 Da PI: 10.0831 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 117.9 | 1.5e-36 | 36 | 139 | 3 | 105 |
DUF822 3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssas.aspess 93 s r+p+ +ErE+n++RE+rRR ++aki+a L+++Gny+lpk+aD+n+Vl ALc eAGw v++DG rk +k + + + + ++ + s+ Zosma208g00360.1 36 SLRRPSDQEREKNRLREKRRRMVTAKIFACLKKHGNYNLPKHADQNDVLFALCDEAGWHVDQDGVISRKEKKVDnDGSTIPATITTnCHRYSQ 128 679*****************************************************************9999884333333333331344444 PP DUF822 94 lqsslkssalas 105 l l++ ++++ Zosma208g00360.1 129 LP-FLQNISTTT 139 44.444443333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.1E-31 | 38 | 136 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence Send to blast |
MEEERTTTPT MRGCIKATRN PWKVKHKGRD GSIRMSLRRP SDQEREKNRL REKRRRMVTA 60 KIFACLKKHG NYNLPKHADQ NDVLFALCDE AGWHVDQDGV ISRKEKKVDN DGSTIPATIT 120 TNCHRYSQLP FLQNISTTTT EEESSAHGLD LTLTLGRF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 4e-12 | 38 | 104 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 4e-12 | 38 | 104 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 4e-12 | 38 | 104 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 4e-12 | 38 | 104 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0K9PL09 | 1e-115 | A0A0K9PL09_ZOSMR; Uncharacterized protein | ||||
STRING | XP_009795965.1 | 1e-36 | (Nicotiana sylvestris) | ||||
STRING | XP_009609992.1 | 9e-37 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13201 | 30 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36780.1 | 1e-15 | BES1/BZR1 homolog 2 |
Link Out ? help Back to Top | |
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Phytozome | Zosma208g00360.1 |