PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma196g00010.1
Common NameZOSMA_196G00010
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bZIP
Protein Properties Length: 365aa    MW: 41546.9 Da    PI: 8.7757
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma196g00010.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.55.2e-072332651749
                       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                       A+rsR RK+++i+eLe+ v+ L+ae +    el
  Zosma196g00010.1 233 AQRSRVRKLQYIAELERNVQILQAEGSGISAEL 265
                       89**********************987777666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0059222281IPR004827Basic-leucine zipper domain
CDDcd147031.16E-13226272No hitNo description
Gene3DG3DSA:1.20.5.1701.1E-5233285No hitNo description
SuperFamilySSF579595.22E-5233275No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MANIQNSAWS GKQPFPPPKS PFPSVTPAYT DCGRNVFSGS RSVSNPKDDR HGNHQRTSSE  60
SFLIDEHPSW LDELLDEPET PVRKGFHRRS SSDSFTNFDV SNMAPNLENS VQEIFRNRNV  120
TSSLPWGSRG FDHYQDAWNS SNYAHVNNCE VPPRVCGTTW NAGGYQGNIQ KMKNINMYQN  180
TGSSSTAGES GLFKSPSIEN KEKVDATFER RDDSMVRYSQ PESDQKRSKQ QFAQRSRVRK  240
LQYIAELERN VQILQAEGSG ISAELQFHDR QNLILSMENK ALRNKLDSLG KERLIKHLQQ  300
EMFEREIARL QTLRHQQQIQ QKQPPIQKHK HNHSGSKDLE SQFANLSMNQ TNPVEDTGTG  360
VFHI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012071280.11e-103uncharacterized protein At4g06598
RefseqXP_020534676.11e-103uncharacterized protein At4g06598
TrEMBLA0A0K9PR200.0A0A0K9PR20_ZOSMR; BZIP transcription factor family protein, expressed
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33103666
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.21e-63bZIP family protein