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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zosma193g00220.1 |
Common Name | ZOSMA_193G00220 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family |
Trihelix |
Protein Properties |
Length: 284aa MW: 33935.9 Da PI: 5.6248 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zosma193g00220.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 63.8 | 3.7e-20 | 37 | 102 | 1 | 66 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkike 66
+Wt e+++ i++r ++++++ + k++k lWe +s+km+e+gf+r+p qCk+kw+nl +ryk +
Zosma193g00220.1 37 QWTYLETKEFIALRWNLDQSFVEMKRNKLLWELISNKMKEKGFQRTPDQCKCKWKNLVTRYKGSES 102
7*************************************************************8775 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 284 aa
Download sequence Send
to blast |
MESGQHYVVH NPYASAVPSR STVAASSSGD QRERLPQWTY LETKEFIALR WNLDQSFVEM 60 KRNKLLWELI SNKMKEKGFQ RTPDQCKCKW KNLVTRYKGS ESRGQFPFQE DMQRIFSDRM 120 QRFLDSNEGN NGLRQPSLGG LSEEEEEEEE EEEEEYDDAL MVIEGDSKEK KQTKNKRKMA 180 MRSTASNNDR QQQYSIENTL RDFVKWQVQM DTEWMKISEA RELERRDMEM KWRNSMEALA 240 AERADIDRKW RAREEERRCR EEERAERRHE LLVALLNKLT NMH*
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