PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma185g00320.1
Common NameZOSMA_185G00320
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family WRKY
Protein Properties Length: 657aa    MW: 71756 Da    PI: 6.8829
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma185g00320.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.73.6e-31256313260
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                       +DgynWrKYGqK v+gsefprsYY+Ct+++C++kk++ers+ d++v e++Y+g+H+h+k
  Zosma185g00320.1 256 EDGYNWRKYGQKLVNGSEFPRSYYKCTYPNCQMKKQLERSH-DGQVAEVVYKGNHDHPK 313
                       7****************************************.***************85 PP
2WRKY106.41.4e-33437495159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy+WrKYGqK+vkg+++prsYY+Ct  gCpv+k+ver+++dp++v++tYeg+Hnh+
  Zosma185g00320.1 437 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNVGCPVRKHVERASHDPEAVITTYEGKHNHD 495
                       59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.0E-26248314IPR003657WRKY domain
PROSITE profilePS5081122.963250314IPR003657WRKY domain
SuperFamilySSF1182903.01E-24253314IPR003657WRKY domain
SMARTSM007749.1E-34255313IPR003657WRKY domain
PfamPF031063.8E-24256312IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.0E-37422497IPR003657WRKY domain
SuperFamilySSF1182901.06E-29429497IPR003657WRKY domain
PROSITE profilePS5081138.354432497IPR003657WRKY domain
SMARTSM007745.4E-40437496IPR003657WRKY domain
PfamPF031062.5E-26438495IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009611Biological Processresponse to wounding
GO:0009961Biological Processresponse to 1-aminocyclopropane-1-carboxylic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 657 aa     Download sequence    Send to blast
MHADSAADHG DPSTLDSTPP PQELGFRGFS SDLRCSSIAG GTGVMAKYKL MPPARLPISR  60
SPRAIITITS PGFSPGALLE SPVLLTNIKP EPSPTTGTFS IPSIPNCSVG PDSLSFARET  120
SNGSHAYGER SSGAFEFKRH TKSCLGSTPL RSNLVSFESK KQHTEQSLQG QNQYQSQALM  180
QSYSVKPENA SAASHQLTLC ASPSNRPIEL NSLIASSSTD ATSSEMHQEK NPDNDCHALQ  240
TDQKGYAASV ADKTSEDGYN WRKYGQKLVN GSEFPRSYYK CTYPNCQMKK QLERSHDGQV  300
AEVVYKGNHD HPKPQPARRS VAVSAIYSNH EEEKNDEFSS LGNIQEERSS KLDRQISQQA  360
DRNSPKEFPS VVASEDDIEG AGAQLNNTHS NNIVPHDDQE SKRRRIDNSV FEVGAMGNKI  420
SREPRVVVQT LSEVDILDDG YRWRKYGQKV VKGNPNPRSY YKCTNVGCPV RKHVERASHD  480
PEAVITTYEG KHNHDVPAAR NSSHATALSM PVIDGGGGVR NSQMQATYIG NISRSFDNTR  540
SIAPQYNRQE ESDTINLDLG VGLISPRNAG RADNNQNPGA EQMPNPHDGH IANSSYGQLA  600
TLQSNSIPAY YVGSDNGMVY VGSREDSGDG FRFRTIPLDQ RSSPYQANVE SMLMSP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A5e-37256498878Probable WRKY transcription factor 4
2lex_A5e-37256498878Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1401405KRRRI
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00455DAPTransfer from AT4G26640Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010905301.11e-176WRKY transcription factor SUSIBA2 isoform X1
TrEMBLA0A0K9PQ720.0A0A0K9PQ72_ZOSMR; Putative WRKY transcription factor
STRINGXP_008800638.11e-174(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67403851
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.21e-120WRKY family protein