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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zosma181g00350.1 |
Common Name | ZOSMA_181G00350 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family |
B3 |
Protein Properties |
Length: 302aa MW: 35054.4 Da PI: 7.1249 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zosma181g00350.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 47.7 | 2.8e-15 | 180 | 268 | 1 | 87 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldg 86
f+k+l++sdv+++gr++lpk+ e + + +k ++ l ++ + +W++k+++ ++ks++yvl+ ++ eFvk n+Lk+gDf+ F+ +
Zosma181g00350.1 180 FQKELKNSDVSNLGRIILPKRESEGNlpylM-VK-DGIYLNIKElFNTTVWRMKYRFwpNNKSRMYVLE-NTGEFVKVNELKSGDFISFY--Q 267
99*********************99999853.33.5667888885566*******9989999999**99.********************..4 PP
S CS
B3 87 r 87
+
Zosma181g00350.1 268 D 268
4 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MDKSTTSNNP PDPLDCNTFL PPPVPQPFAN IDGFGADHTI YQHQRQYQVE QPNVYLYPNI 60 SMENVAGVDP QYYYNNSNIS NNGVMWPLNN RILDESRTRM QQQEQQRQEH QLEQLQRQIE 120 KLQKLQKEQD QLHSSGTSYH ALFPMTQPNS SIGITLQFSP YTQDFSLFPS LVHLGYKFLF 180 QKELKNSDVS NLGRIILPKR ESEGNLPYLM VKDGIYLNIK ELFNTTVWRM KYRFWPNNKS 240 RMYVLENTGE FVKVNELKSG DFISFYQDIN SQLYICCRNV DKLLQETRSV PTANAGNRSS 300 S*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
6j9c_A | 4e-34 | 177 | 276 | 10 | 109 | B3 domain-containing transcription factor LEC2 |
6j9c_D | 4e-34 | 177 | 276 | 10 | 109 | B3 domain-containing transcription factor LEC2 |
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