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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zosma177g00200.1 | ||||||||
Common Name | ZOSMA_177G00200 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family | bHLH | ||||||||
Protein Properties | Length: 207aa MW: 23686.5 Da PI: 4.6535 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.1 | 2.8e-12 | 146 | 192 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 a n +Er+RR++iN+++ L +l+P + +K sK +L + +YIk+Lq Zosma177g00200.1 146 ARNFNERKRRRDINNKIKALHDLVPVC-----QKTSKECMLDEIYNYIKYLQ 192 7899**********************9.....8******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 14.037 | 142 | 191 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.3E-14 | 145 | 198 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.39E-7 | 146 | 190 | No hit | No description |
Pfam | PF00010 | 9.4E-10 | 146 | 192 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.49E-15 | 146 | 198 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 9.2E-11 | 148 | 197 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence Send to blast |
MEMNFNGEEW WNNQVHESDE WKELGAWISK EIIENQDVDD MDRFPGAVLP DVAEMVNKAT 60 HVATNFSTLS PLSQLFQINP SEIQEGFLQD YQVTDITSPL ITNTNYHASD DDDDEGKIGA 120 NDKKRIRLTD NQNVMPSSSC QTSAAARNFN ERKRRRDINN KIKALHDLVP VCQKTSKECM 180 LDEIYNYIKY LQLQLQKLCL LTGKGR* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 151 | 155 | RKRRR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0K9PTY5 | 1e-153 | A0A0K9PTY5_ZOSMR; Uncharacterized protein |
Link Out ? help Back to Top | |
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Phytozome | Zosma177g00200.1 |