PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma174g00410.1
Common NameZOSMA_174G00410
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family BES1
Protein Properties Length: 298aa    MW: 32276.1 Da    PI: 8.2319
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma174g00410.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822187.36.3e-5831242130
            DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspessl 94 
                       ++gr+ twkErEnnkrRERrRRaiaaki++GLRa+Gn+klpk++DnneVlkALc +AGw+ve+DGttyrkgskp  ++e++g+ as  ++  +
  Zosma174g00410.1   3 SGGRMATWKERENNKRRERRRRAIAAKIFSGLRAYGNFKLPKHCDNNEVLKALCVDAGWTVEEDGTTYRKGSKPA-ATETVGNGASFMISPLY 94 
                       689************************************************************************.77777777666655444 PP

            DUF822  95 qsslkssalaspvesysaspksssfpspssldsisl 130
                       +      a++sp++sy+asp+sssfpsp+++++ s+
  Zosma174g00410.1  95 S------AFPSPAPSYHASPSSSSFPSPTRVENSSA 124
                       4......99*********************987654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.4E-563125IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009742Biological Processbrassinosteroid mediated signaling pathway
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MPSGGRMATW KERENNKRRE RRRRAIAAKI FSGLRAYGNF KLPKHCDNNE VLKALCVDAG  60
WTVEEDGTTY RKGSKPAATE TVGNGASFMI SPLYSAFPSP APSYHASPSS SSFPSPTRVE  120
NSSAPPTVPN TEPYFLPHFR NLPPLRISNS APVTPPLSSP TCRPAKMLKP DWATYANSFH  180
HPIFAASEPS SPTRRNGHPA PIPECDESDA STVDSDRWGV NFQMTAPPSP TFNLVNPTAT  240
SLPETIAMAV VSERGGIVGS EFQFECGSVK AWAGERIHEF GVDDLELTLG NGKHNHG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A8e-23683372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B8e-23683372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C8e-23683372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D8e-23683372449Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00237DAPTransfer from AT1G75080Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009411027.12e-95PREDICTED: protein BZR1 homolog 1
SwissprotQ94A431e-82BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A0K9PS010.0A0A0K9PS01_ZOSMR; BES1/BZR1-like protein
STRINGXP_009349751.12e-94(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54743453
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.21e-67BES1 family protein