PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma174g00400.1
Common NameZOSMA_174G00400
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bZIP
Protein Properties Length: 340aa    MW: 37000.6 Da    PI: 6.7447
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma174g00400.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.36.1e-22241303163
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       e+e+kr++rk++NRe+ArrsRqRK++e+eeL +kv+eL++eN  L++e++e+k  +++l+se+
  Zosma174g00400.1 241 EREIKRQKRKESNRESARRSRQRKQQECEELSNKVEELSSENANLRNEIDEIKRRCKELESEN 303
                       89**********************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.8E-15193IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1701.2E-18236301No hitNo description
PfamPF001703.4E-19241303IPR004827Basic-leucine zipper domain
SMARTSM003381.2E-19241305IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.806243306IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-13244300No hitNo description
CDDcd147026.56E-24246296No hitNo description
PROSITE patternPS000360248263IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0010629Biological Processnegative regulation of gene expression
GO:0090342Biological Processregulation of cell aging
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MGSTEETVQG KPVTSVQTGQ EVQTTPSMYP DWPSMAAYYG GASTGGPPPA FFSHHSPSPY  60
MWSGQHLIPP PYGTHVPYHH PMYPPGIYPH PAITQGATVP VVETQGRSDG KKHNSTNKSK  120
TTGKPANGVK ETYTANDDTS QSNDGSGTEG SSNGGDTMAN QHDGLETGKR SLENINAEGK  180
VAASALPTNL NIGMDLWNGS HAGSLPIKER PGSVNIVPTV SPSKMKRRAG IVPGNQWVQD  240
EREIKRQKRK ESNRESARRS RQRKQQECEE LSNKVEELSS ENANLRNEID EIKRRCKELE  300
SENLSMQEEF GHICTSDQLQ STMEGNANNN SSVTDTSRQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1257263RRSRQRK
2257264RRSRQRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00039PBMTransfer from AT4G36730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018717402.14e-76PREDICTED: G-box-binding factor 1 isoform X3
TrEMBLA0A0K9PUB10.0A0A0K9PUB1_ZOSMR; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.12e-48G-box binding factor 1