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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zosma174g00060.1 |
| Common Name | ZOSMA_174G00060 |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
WRKY |
| Protein Properties |
Length: 428aa MW: 47683.3 Da PI: 7.9259 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma174g00060.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 97.5 | 8.5e-31 | 194 | 251 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkg+e+prsYY+C+ ++Cp+kk ve + d++++ei+Y+g Hnh+k
Zosma174g00060.1 194 DDGYNWRKYGQKQVKGNENPRSYYKCSNPNCPTKKIVEIAI-DGRITEIVYKGVHNHPK 251
8***************************************9.***************85 PP
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| 2 | WRKY | 103.5 | 1.1e-32 | 343 | 401 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+ +prsYY+Cts gC v+k+versa+d ++v++tYeg+H h+
Zosma174g00060.1 343 LDDGYRWRKYGQKVVKGNSNPRSYYKCTSLGCLVRKQVERSAHDASAVITTYEGKHLHD 401
59*******************************************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 428 aa
Download sequence Send
to blast |
MAGTMATTSA DSNQTSPPFF SKIYNNNSFS ELLNGVGAEE AGYVGDGLPR FKSTPPPSLP 60
ISQPSIFSPS NYFAIPAGLS PAELLDSPVL HAHSHLLPSP TTGAFSAEQS YNWKSNSSID 120
QRHQLTKNED EDVESSIFSD FAFHPNPSTD QQQQQQQKKE EEGWTKVERP SSEYYSNQRL 180
EQNQIPVRRN NKSDDGYNWR KYGQKQVKGN ENPRSYYKCS NPNCPTKKIV EIAIDGRITE 240
IVYKGVHNHP KPVSTRKNSS SSYHPYSQNL QSSSMTLQQQ QQASENSSVS VDDESEGRLC 300
FEEPSSKRGK SEFDSGDRGV VTMNKTVREA RVVVQTTSDI DILDDGYRWR KYGQKVVKGN 360
SNPRSYYKCT SLGCLVRKQV ERSAHDASAV ITTYEGKHLH DVPVARGGGS LSNKQNPLQN 420
YGFSGYY*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription activator (PubMed:26025535). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:19199048, PubMed:26025535). Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (PubMed:15618416, PubMed:19199048, PubMed:26025535). {ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048, ECO:0000269|PubMed:26025535}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:15618416, PubMed:19199048). Slightly down-regulated by gibberellic acid (GA) (PubMed:15618416). Accumulates in response to jasmonic acid (MeJA) (By similarity). {ECO:0000250|UniProtKB:Q6B6R4, ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048}. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Zhang ZL, et al.
A negative regulator encoded by a rice WRKY gene represses both abscisic acid and gibberellins signaling in aleurone cells.
Plant Mol. Biol., 2009. 70(1-2): p. 139-51
[PMID:19199048] - Basu S,Roychoudhury A
Expression profiling of abiotic stress-inducible genes in response to multiple stresses in rice (Oryza sativa L.) varieties with contrasting level of stress tolerance.
Biomed Res Int, 2014. 2014: p. 706890
[PMID:25110688] - Zhang L, et al.
Three WRKY transcription factors additively repress abscisic acid and gibberellin signaling in aleurone cells.
Plant Sci., 2015. 236: p. 214-22
[PMID:26025535]
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