PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zosma16g01820.1
Common NameZOSMA_16G01820
Organism
Zostera marina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
Family bZIP
Protein Properties Length: 337aa    MW: 37656.9 Da    PI: 8.8074
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zosma16g01820.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.96.1e-104578740
                     HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  7 errkqkNReAArrsRqRKkaeieeLeekvkeLea 40
                      rr+++NReAAr+sR+RKk ++++Le     L++
  Zosma16g01820.1 45 LRRLAQNREAARKSRLRKKVYVQQLESSRIRLTQ 78
                     59***********************985555544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.3E-83885No hitNo description
SMARTSM003383.2E-839127IPR004827Basic-leucine zipper domain
PfamPF077164.4E-74085IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.8874185IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-74385No hitNo description
PROSITE patternPS0003604661IPR004827Basic-leucine zipper domain
PfamPF141441.8E-29136210IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MELSNIAGKE KESKAAALRR GVNNRKGAGS SSEHEGPKTP DPRILRRLAQ NREAARKSRL  60
RKKVYVQQLE SSRIRLTQLE QELQRARAQG IIIGGGALAN QVISGSGGGT VSGLSSEAAM  120
FDVEYARWLD EHNRVISELQ AALQEQISEN ELRMYVESFL AHCNEMVSLK SMVAKTDVFH  180
LLSGIWKSPA ERCFMWMGGF RPSDLIKIVV RHVEPLSEQQ ILNICGLQQS TQETEDALTQ  240
GLEALHNSLS DTIISDALGY PSNMGNYMDQ MMVAVNKIST LEAFAHQADN LRQQTLHRLH  300
QILTVHQVAR GFLAIADYFH RLRSLSSLWL SRPRQE*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026415566.11e-171bZIP transcription factor TGA10-like isoform X3
SwissprotQ52MZ21e-161TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0K9PTD20.0A0A0K9PTD2_ZOSMR; BZIP transcription factor
STRINGXP_010257393.11e-170(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78763543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-123bZIP family protein