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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Zosma15g00360.1 |
| Common Name | ZOSMA_15G00360 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
LBD |
| Protein Properties |
Length: 322aa MW: 34699 Da PI: 6.6032 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma15g00360.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 98.7 | 5.7e-31 | 4 | 107 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89
+C++C+vlr++C+++C ++p++ p++q++++ +++k++G++ +++l++a pe+ r+++++sl+yeA+ r+ +P+yG+vg+++++++q++q
Zosma15g00360.1 4 SCNGCRVLRKGCSENCSIRPCLqwiknPDSQANATVFLAKFYGRAGLMNLINAGPENLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQMCQ 97
6********************************************************************************************* PP
DUF260 90 lkaelallke 99
+++e++l ++
Zosma15g00360.1 98 TAVEAVLKGT 107
***9988765 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MRMSCNGCRV LRKGCSENCS IRPCLQWIKN PDSQANATVF LAKFYGRAGL MNLINAGPEN 60
LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GSWQMCQTAV EAVLKGTPIV QISSETAADT 120
PSPPLKAYDI RHVFKEENIS STPGSGGASS GSDHLHKVAT KSTRTRFKRP GNGNTKLKLS 180
RPAGSAAGSE AEPIDADVES RWRLSCPVDC QRTPTSHESS GSHDSSAPVT ACRENESVFS 240
EETAENASML TAEQEKHDSC ECDLELDLKL GLEPMSQHSR SNSMNGAPPP PPPKRCEKSI 300
DGWDSSTDLC RVDLALDLIT S*
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