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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zosma135g00350.1 |
| Common Name | ZOSMA_135G00350 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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| Family |
TCP |
| Protein Properties |
Length: 283aa MW: 31668.2 Da PI: 6.8621 |
| Description |
TCP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zosma135g00350.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCP | 133.7 | 1.7e-41 | 87 | 219 | 4 | 134 |
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa 95
++drhski T++g+RdRR+Rls+++a++fF Lqd LGfdk+skt++WLl++++ ai lt+ s s s+c ++ +++++++ + ++a + +
Zosma135g00350.1 87 RRDRHSKIVTAKGPRDRRMRLSLDVAKKFFYLQDVLGFDKASKTVDWLLTKSNDAIRSLTSCASGSGSQCrSHLEEEEEEEGKIVDSAVITPT 179
89************************************************************9999999*64444444444444444444444 PP
TCP 96 .kskksqksaasalnlakesrakarararertrekmrikn 134
++ ++++a+s+ +l +esrakarararer re+ r k+
Zosma135g00350.1 180 gTKPLTNRKATSNPALVRESRAKARARARERARERTREKK 219
477777777788899999*********9999999988775 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 283 aa
Download sequence Send
to blast |
MFSAYTDRGF QFQTYDGNDA DHQHGGFDEL LLAIQLMPGA SSNLGQNISG PLRDPPSPPS 60
LPPPPQQEMQ EVQVVAGSGS GRKRGLRRDR HSKIVTAKGP RDRRMRLSLD VAKKFFYLQD 120
VLGFDKASKT VDWLLTKSND AIRSLTSCAS GSGSQCRSHL EEEEEEEGKI VDSAVITPTG 180
TKPLTNRKAT SNPALVRESR AKARARARER ARERTREKKI SMSMAIHHQH QHESSMNVDY 240
PLSFFQEFAG GNSCFHQQQQ QEKEEEEEEE EQEGGVLHPY FL*
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| Nucleic Localization
Signal ? help
Back to Top |
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| No. |
Start |
End |
Sequence |
| 1 | 205 | 217 | RARERARERTREK |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that functions as a negative regulator of lateral branching, presumably through its expression in axillary buds (PubMed:12581309, PubMed:20547591). Involved in the fine tuning of shoot branching. May function as an integrator of multiple signaling pathways to regulate the development of axillary buds. Works partially downstream of strigolactones to inhibit bud outgrowth (PubMed:20547591). Binds to MADS57 to suppress the negative regulation of D14 by MADS57 and balance the expression of D14 for tillering (PubMed:23463009). {ECO:0000269|PubMed:12581309, ECO:0000269|PubMed:20547591, ECO:0000269|PubMed:23463009}. |
| Publications
? help Back to Top |
- Lukens L,Doebley J
Molecular evolution of the teosinte branched gene among maize and related grasses.
Mol. Biol. Evol., 2001. 18(4): p. 627-38
[PMID:11264415] - Takeda T, et al.
The OsTB1 gene negatively regulates lateral branching in rice.
Plant J., 2003. 33(3): p. 513-20
[PMID:12581309] - Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Arite T, et al.
DWARF10, an RMS1/MAX4/DAD1 ortholog, controls lateral bud outgrowth in rice.
Plant J., 2007. 51(6): p. 1019-29
[PMID:17655651] - Lewis JM, et al.
Overexpression of the maize Teosinte Branched1 gene in wheat suppresses tiller development.
Plant Cell Rep., 2008. 27(7): p. 1217-25
[PMID:18392625] - Minakuchi K, et al.
FINE CULM1 (FC1) works downstream of strigolactones to inhibit the outgrowth of axillary buds in rice.
Plant Cell Physiol., 2010. 51(7): p. 1127-35
[PMID:20547591] - Mondragón-Palomino M,Trontin C
High time for a roll call: gene duplication and phylogenetic relationships of TCP-like genes in monocots.
Ann. Bot., 2011. 107(9): p. 1533-44
[PMID:21444336] - Xia K, et al.
OsTIR1 and OsAFB2 downregulation via OsmiR393 overexpression leads to more tillers, early flowering and less tolerance to salt and drought in rice.
PLoS ONE, 2012. 7(1): p. e30039
[PMID:22253868] - Guo S, et al.
The interaction between OsMADS57 and OsTB1 modulates rice tillering via DWARF14.
Nat Commun, 2013. 4: p. 1566
[PMID:23463009] - Byeon Y,Back K
An increase in melatonin in transgenic rice causes pleiotropic phenotypes, including enhanced seedling growth, delayed flowering, and low grain yield.
J. Pineal Res., 2014. 56(4): p. 408-14
[PMID:24571270] - Yano K, et al.
Isolation of a novel lodging resistance QTL gene involved in strigolactone signaling and its pyramiding with a QTL gene involved in another mechanism.
Mol Plant, 2015.
[PMID:25381289] - Chen Z,Gao X,Zhang J
Alteration of osa-miR156e expression affects rice plant architecture and strigolactones (SLs) pathway.
Plant Cell Rep., 2015. 34(5): p. 767-81
[PMID:25604991] - Yano K, et al.
Isolation of a novel lodging resistance QTL gene involved in strigolactone signaling and its pyramiding with a QTL gene involved in another mechanism.
Mol Plant, 2015. 8(2): p. 303-14
[PMID:25616386] - Jung H,Lee DK,Choi YD,Kim JK
OsIAA6, a member of the rice Aux/IAA gene family, is involved in drought tolerance and tiller outgrowth.
Plant Sci., 2015. 236: p. 304-12
[PMID:26025543] - Li S
The Arabidopsis thaliana TCP transcription factors: A broadening horizon beyond development.
Plant Signal Behav, 2015. 10(7): p. e1044192
[PMID:26039357] - Yang X, et al.
Distinct Regulatory Changes Underlying Differential Expression of TEOSINTE BRANCHED1-CYCLOIDEA-PROLIFERATING CELL FACTOR Genes Associated with Petal Variations in Zygomorphic Flowers of Petrocosmea spp. of the Family Gesneriaceae.
Plant Physiol., 2015. 169(3): p. 2138-51
[PMID:26351309] - De Paolo S,Gaudio L,Aceto S
Analysis of the TCP genes expressed in the inflorescence of the orchid Orchis italica.
Sci Rep, 2015. 5: p. 16265
[PMID:26531864] - Álvarez-Salgado E,Arredondo-Peter R
Effect of the synthesis of rice non-symbiotic hemoglobins 1 and 2 in the recombinant Escherichia coli TB1 growth.
F1000Res, 2015. 4: p. 1053
[PMID:26973784] - Li X, et al.
MicroRNA393 is involved in nitrogen-promoted rice tillering through regulation of auxin signal transduction in axillary buds.
Sci Rep, 2016. 6: p. 32158
[PMID:27574184]
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