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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zosma120g00310.1 |
Common Name | ZOSMA_120G00310 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family |
Trihelix |
Protein Properties |
Length: 331aa MW: 38720.3 Da PI: 8.0146 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zosma120g00310.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 84 | 1.9e-26 | 62 | 143 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W++qe+++ i +r e+e++++ +k++k+lWe vs +mrergf+rsp+qCk+kw+nl +ryk ++++ ++ +++cp+fd+l+
Zosma120g00310.1 62 QWSQQETREFISIRAELERDFNVSKRNKTLWEVVSLRMRERGFRRSPEQCKCKWKNLINRYKGKETSDPNN----ERHCPFFDELH 143
7**************************************************************99999984....678******98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 331 aa
Download sequence Send
to blast |
MDELMQQEAL GRIMASLPIH TPVEASGSEM QVGSSFDGIG FSGVTMKKEG TVGVVGGERV 60 PQWSQQETRE FISIRAELER DFNVSKRNKT LWEVVSLRMR ERGFRRSPEQ CKCKWKNLIN 120 RYKGKETSDP NNERHCPFFD ELHAIFRERA NGMQRIHLES EPAAGAIAIP NQQQHLKKKG 180 KRISAVTRTK SSDEEENDSM SCYFDDNSEG DERVIERNRK KRAPKVNNTS SGGGGGNSVS 240 EVLHDWFEHQ RRMEVQWREA SERRAKERWV FEQDWRMSME KLERERFTSE QAWREREENR 300 RIREENRAEK RDFLLTSLLH KLLDQDEQNM *
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