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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zosma116g00640.1 |
Common Name | ZOSMA_116G00640 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
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Family |
Trihelix |
Protein Properties |
Length: 252aa MW: 29135 Da PI: 8.8968 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zosma116g00640.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 66.2 | 6.9e-21 | 30 | 113 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W+++e+ +Li a+++m+ +lrrg lk ++W+ev++ + ++ g+ +r+ +qC++k+e+l+kry+ ++ ++ +s+s ++++dq+e
Zosma116g00640.1 30 WSEHETSHLIGAYQDMWYSLRRGPLKSHQWDEVAASLsSRCGYgSRTGTQCRHKMEKLRKRYRIERGKLSS---NSRSYWVHYDQME 113
*************************************7667888********************9999987...56779*******7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 252 aa
Download sequence Send
to blast |
MASSSDPQHP VSTLNPVPRP KKNSPPGQAW SEHETSHLIG AYQDMWYSLR RGPLKSHQWD 60 EVAASLSSRC GYGSRTGTQC RHKMEKLRKR YRIERGKLSS NSRSYWVHYD QMELMESGPH 120 PISVCPPVIP VCPPKAQVEV FDNEDEEDDE NESEEDMIRT KERVAWKSNN VDCNYESVRA 180 AKKLVSVVKR FAEGLYRIEK RKMDMMTELE RDWMDMELKR QDMWMRSGNY LANKISSAFR 240 SSKKAKKASD I*
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