PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zosma101g00420.1 | ||||||||
Common Name | ZOSMA_101G00420 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Alismatales; Zosteraceae; Zostera
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 99aa MW: 10984.2 Da PI: 8.4545 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 31.2 | 7.3e-10 | 41 | 81 | 1 | 43 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkree 43 +fY +Y ++GFsvrks+++++ +ng it+rt+vCske k++ Zosma101g00420.1 41 NFYYRYVGRIGFSVRKSTTSSN-TNG-ITRRTLVCSKEVKNNA 81 6***************987766.555.***********99976 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 4.0E-7 | 41 | 85 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 99 aa Download sequence Send to blast |
MKIVMESSTQ DNTDLDLQQS ITSDDHPSTD MSFNTLVDAE NFYYRYVGRI GFSVRKSTTS 60 SNTNGITRRT LVCSKEVKNN AIIPSTTSSL KKTEYSKS* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0K9Q589 | 1e-64 | A0A0K9Q589_ZOSMR; Uncharacterized protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Zosma101g00420.1 |