![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zmw_sc12562.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 188aa MW: 21089.6 Da PI: 8.9546 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 43.8 | 8.3e-14 | 2 | 132 | 14 | 128 |
NAM 14 lvveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat...gkrknra 77 l+++yL+kk++g + l+ + +++ d++++ P+ L + + +++ ++ yfF+k++ ++ +r+ + Zmw_sc12562.1.g00010.1.am.mk 2 LINHYLRKKIDGAEvfsnLTNAAYFHDEDVCSARPEVLVRahtmparvpsREAGDGQQFYFFTKARFIGNKlnmRSRTIKN 82 89************8865444356**************7446777766543223555778888877555441013344443 PP NAM 78 tk.sgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128 t + +W+a g++k+v ++ + L ++ ++ pk ek W+m ey++ Zmw_sc12562.1.g00010.1.am.mk 83 TGdKETWHAEGRTKPVDG---TADAYITKLSYHVKTGPKtVEKPGWIMTEYTM 132 334778**********77...34455667889965555415799*******87 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 13.835 | 1 | 151 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.6E-8 | 2 | 131 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.75E-15 | 2 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 188 aa Download sequence Send to blast |
LLINHYLRKK IDGAEVFSNL TNAAYFHDED VCSARPEVLV RAHTMPARVP SREAGDGQQF 60 YFFTKARFIG NKLNMRSRTI KNTGDKETWH AEGRTKPVDG TADAYITKLS YHVKTGPKTV 120 EKPGWIMTEY TMSDGKRKAA DDLGEATPST RPRQIDEDRQ HAAVLEFGAE RSQLTQDMPA 180 NSNSNSAL |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6280 | 15 | 45 |