PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc10737.1.g00010.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family NAC
Protein Properties Length: 267aa    MW: 29865.5 Da    PI: 6.7279
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc10737.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.52.4e-14513514128
                           NAM  14 lvveyLkkkvegkk....leleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyatgkrknratk. 79 
                                   l+++yL+kk++g +    l+ +  +++ d++++ P+ L +          + +++ ++ yfFsk++  +++ + ++r++k 
  Zmw_sc10737.1.g00010.1.am.mk   5 LINHYLRKKIDGAEvfsnLTNAAYFHDEDVCSARPEVLVRahtmparvpsREAGDGQQFYFFSKARLIENKLNMRSRTIKn 85 
                                   89************8865444356**************7446777766543333566889999998777664444443222 PP

                           NAM  80 ...sgyWkatgkdkevlskkgelvglkktLvfykgrapk.gektdWvmheyrl 128
                                      + +W+a g++k+v     ++ g  + L ++ ++ pk  ek  W+m ey++
  Zmw_sc10737.1.g00010.1.am.mk  86 tgdKETWHAEGRTKPVDG---TADGYITKLSYHVKTGPKtVEKPGWIMTEYSF 135
                                   224778**********65...67899999****66555515799*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.8031151IPR003441NAC domain
PfamPF023655.7E-95134IPR003441NAC domain
SuperFamilySSF1019411.7E-195151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
SNALLINHYL RKKIDGAEVF SNLTNAAYFH DEDVCSARPE VLVRAHTMPA RVPSREAGDG  60
QQFYFFSKAR LIENKLNMRS RTIKNTGDKE TWHAEGRTKP VDGTADGYIT KLSYHVKTGP  120
KTVEKPGWIM TEYSFKDTKE GDLVLCKVYK SPRGPVRSKA PSLPAMLDRK RKAAEDLEEA  180
TPSTRPLQID ENHQHAAVPE FGAERSQTQS MPASLDSNSA LEDIDWSWFM PESEAERSQP  240
HLAKPASSGS NVTSEDIELY AKLLLAD
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP62801545