![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Zmw_sc09374.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 23060.1 Da PI: 5.1681 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 30.3 | 1.1e-09 | 1 | 34 | 19 | 55 |
AP2 19 IrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 Irdp++ + r++lg+f+ta+eAa a+++a+++++g Zmw_sc09374.1.g00010.1.am.mk 1 IRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 34 788754...59************************98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.11E-16 | 1 | 41 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 8.4E-18 | 1 | 41 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.05E-11 | 1 | 42 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 13.511 | 1 | 42 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.3E-9 | 1 | 48 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 3.8E-5 | 8 | 34 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 219 aa Download sequence Send to blast |
IRDPTTKERH WLGTFDTAQE AALAYDRAAL SMKGAQARTN FVFAHAAAAY SNNCPPFLAH 60 PSTCGQAPSS TVHQYGGQQH SVGASSSDNG SYHHHCYYSQ SPAGSGERSM PLGVDRADGS 120 LLAGGHDLLF SRADDNSGYL SSVVPASCLR PRSSAAAAED LQRFSDADAY GMLGLREDVD 180 DMVAGFWAGA GDAEQLGAEM VASSSQGSDV YSPFSFLSH |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Required to prevent the formation of axillary meristems within the spikelet meristem and permit the subsequent establishment of floral meristem identity (PubMed:12835399, PubMed:14503923). Mediates the transition from spikelet to floret meristem (PubMed:14503923). Determines the transition from panicle branching to spikelet formation. May specify floral organ identity by regulating the class B genes (Agamous-like genes) MADS6 and MADS17, as well as class E genes MADS1, MADS7 and MADS8 in floral meristem (PubMed:26744119). Possesses transactivation activity (PubMed:12835399). {ECO:0000269|PubMed:12835399, ECO:0000269|PubMed:14503923, ECO:0000269|PubMed:26744119}. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_002463362.2 | 1e-84 | ethylene-responsive transcription factor ERF086 | ||||
Refseq | XP_025804267.1 | 7e-85 | ethylene-responsive transcription factor FZP | ||||
Swissprot | Q8H3Q1 | 1e-67 | FZP_ORYSJ; Ethylene-responsive transcription factor FZP | ||||
TrEMBL | A0A1E5UMV0 | 5e-84 | A0A1E5UMV0_9POAL; Ethylene-responsive transcription factor ERF086 | ||||
STRING | Pavir.Ba00192.1.p | 1e-82 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP10525 | 28 | 38 |