PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc07654.1.g00020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 97aa MW: 11264.6 Da PI: 6.254 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 55.8 | 1.6e-17 | 29 | 94 | 1 | 67 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkk 67 lppGfrFhPtdee+++ yL++kv ++++++ +i e+d++k+e w+Lp + + +ek +f+ +r+k+ Zmw_sc07654.1.g00020.1.sm.mk 29 LPPGFRFHPTDEEIINSYLRAKVLDNNFTA-LAIGEADLNKSELWELPLMENMGEKVGHFYYQRNKQ 94 79*************************999.67***************5555566777999999886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 6.41E-18 | 26 | 95 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 19.542 | 29 | 97 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.2E-8 | 30 | 73 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 97 aa Download sequence Send to blast |
MDNRKRTTLE KLHREASKGF NGDGNGLDLP PGFRFHPTDE EIINSYLRAK VLDNNFTALA 60 IGEADLNKSE LWELPLMENM GEKVGHFYYQ RNKQWPQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018473507.1 | 2e-27 | PREDICTED: NAC domain-containing protein 79-like | ||||
Swissprot | Q9FLJ2 | 3e-27 | NC100_ARATH; NAC domain-containing protein 100 | ||||
TrEMBL | A0A0D3B1S3 | 5e-25 | A0A0D3B1S3_BRAOL; Uncharacterized protein | ||||
TrEMBL | A0A178USB8 | 7e-25 | A0A178USB8_ARATH; NAC100 | ||||
TrEMBL | A0A2I0L9H9 | 4e-25 | A0A2I0L9H9_PUNGR; Uncharacterized protein | ||||
TrEMBL | A0A397ZUK5 | 6e-25 | A0A397ZUK5_BRACM; Uncharacterized protein | ||||
TrEMBL | A0A3N6RC44 | 5e-25 | A0A3N6RC44_BRACR; Uncharacterized protein (Fragment) | ||||
TrEMBL | M4CQG0 | 6e-25 | M4CQG0_BRARP; Uncharacterized protein | ||||
STRING | Lus10026879 | 8e-26 | (Linum usitatissimum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP25541 | 5 | 5 |
Publications ? help Back to Top | |||
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