PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc07539.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

CPP

Protein Properties

Length: 463aa MW: 50323 Da PI: 7.1632

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc07539.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47.8	2.9e-15	152	189	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k+C+Ckks+Clk+YC C+a+g++C+e+C Ce C Nk Zmw_sc07539.1.g00010.1.sm.mkhc 152 IKSCSCKKSRCLKLYCVCYASGSHCTESCGCEPCLNKP 189 589*********************************85 PP
2	TCR	44.8	2.4e-14	230	265	4	39
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++C+Ckks ClkkYC+C++ ++ Cs +CkCedCkN Zmw_sc07539.1.g00010.1.sm.mkhc 230 RKCTCKKSGCLKKYCDCYQGMAGCSINCKCEDCKNP 265 79*********************************5 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01114	5.6E-9	150	191	IPR033467	Tesmin/TSO1-like CXC domain
PROSITE profile	PS51634	27.191	151	267	IPR005172	CRC domain
Pfam	PF03638	2.7E-11	153	188	IPR005172	CRC domain
SMART	SM01114	1.6E-12	229	268	IPR033467	Tesmin/TSO1-like CXC domain
Pfam	PF03638	1.7E-10	230	264	IPR005172	CRC domain

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence Send to blast
ASCTVRSIPS SPLGNPSPRR PAHPFRPYAR PTPPPSPAAL ARLRFVVTAN PAPPVPPIVA 60 PPVPDPMDAE EGPTAPEAEA AGSDPDDAER TASPPPPPAP TPAPPPVPPV STEAAADPES 120 VGPPPDVSPL PAEANGSFDR RKKRKTEDGD GIKSCSCKKS RCLKLYCVCY ASGSHCTESC 180 GCEPCLNKPI QGAQRSAPAP VLPLKFAKTS ETGQDLLEQP LRSPMDIFRR KCTCKKSGCL 240 KKYCDCYQGM AGCSINCKCE DCKNPFGRKV GIILDGKSSF VVPPTLNEGN GTEVDSSDDE 300 DDYYMNRAPS SIPPSPVSRE SSFQQDTLVG VEIQTLNGHL YPKPLTQVRP DSSSWQFTKR 360 PGEYARGEQW NFSRRPSEDG TSDAMEGHND PKFQRTNKKL ENHMDQFSIP RCIEVMNSMA 420 ELSPIEKSLA PDVFLDPSNR EIFLTLAVDV RTLWLRRKMK SLV

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence Send to blast

ASCTVRSIPS SPLGNPSPRR PAHPFRPYAR PTPPPSPAAL ARLRFVVTAN PAPPVPPIVA  60
PPVPDPMDAE EGPTAPEAEA AGSDPDDAER TASPPPPPAP TPAPPPVPPV STEAAADPES  120
VGPPPDVSPL PAEANGSFDR RKKRKTEDGD GIKSCSCKKS RCLKLYCVCY ASGSHCTESC  180
GCEPCLNKPI QGAQRSAPAP VLPLKFAKTS ETGQDLLEQP LRSPMDIFRR KCTCKKSGCL  240
KKYCDCYQGM AGCSINCKCE DCKNPFGRKV GIILDGKSSF VVPPTLNEGN GTEVDSSDDE  300
DDYYMNRAPS SIPPSPVSRE SSFQQDTLVG VEIQTLNGHL YPKPLTQVRP DSSSWQFTKR  360
PGEYARGEQW NFSRRPSEDG TSDAMEGHND PKFQRTNKKL ENHMDQFSIP RCIEVMNSMA  420
ELSPIEKSLA PDVFLDPSNR EIFLTLAVDV RTLWLRRKMK SLV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004963115.1	1e-177	protein tesmin/TSO1-like CXC 7
TrEMBL	K3Z6R9	1e-176	K3Z6R9_SETIT; Uncharacterized protein
STRING	Si022238m	1e-177	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP9610	28	34