PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc07513.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 238aa MW: 24719.9 Da PI: 6.0047

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc07513.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	28	4.3e-09	219	238	2	21
--SS-EEEEEEE--TT-SS- CS WRKY 2 dDgynWrKYGqKevkgsefp 21 +D ++WrKYGqK++kgs++p Zmw_sc07513.1.g00030.1.sm.mk 219 SDLWAWRKYGQKPIKGSPYP 238 699***************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50811	12.507	213	238	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	2.5E-7	215	238	IPR003657	WRKY domain
SuperFamily	SSF118290	3.01E-6	216	238	IPR003657	WRKY domain
Pfam	PF03106	1.7E-4	220	238	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence Send to blast
MCDYFSQRME GDHNHQHRQA GDLADIVRAG GVGLADLPST PTEWHLPAEP GTTSFFPPPQ 60 EQSSSDDDGF VVADALAVGL PDPFGTRDYR AASATGAAGF FDFEAPVGDG GGALLDCGGG 120 GVVVPRATPV LSPREIRPYP GMMAGDAVKL LGMPTVMPGG LTVGPPCAFD GVGGLHQMPS 180 PCGGDGRIKR RKNQARKVVC IPAPAALAGG RTTGEVVPSD LWAWRKYGQK PIKGSPYP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	185	193	GRIKRRKNQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004953547.1	9e-85	probable WRKY transcription factor 14
TrEMBL	A0A3L6QI17	7e-86	A0A3L6QI17_PANMI; Putative WRKY transcription factor 14
TrEMBL	K3YS51	2e-83	K3YS51_SETIT; Uncharacterized protein
STRING	Si017095m	3e-84	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2592	38	88