PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc07460.1.g00010.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 378aa    MW: 40696.3 Da    PI: 11.8745
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc07460.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.4e-18305355256
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                   +y+GVr+++ +gr++AeIrdp     r + ++lg+f++ae Aa+a++aa+++l+g+
  Zmw_sc07460.1.g00010.1.am.mk 305 KYRGVRRRP-SGRYAAEIRDP---A-RkTPIWLGTFDSAEAAARAYDAAARSLRGA 355
                                   8********.7*********8...2.35*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-11305354IPR001471AP2/ERF domain
CDDcd000189.85E-14305361No hitNo description
SuperFamilySSF541713.66E-20305363IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.9E-28305363IPR001471AP2/ERF domain
SMARTSM003805.1E-31305368IPR001471AP2/ERF domain
PROSITE profilePS5103221.628305362IPR001471AP2/ERF domain
PRINTSPR003672.3E-7306317IPR001471AP2/ERF domain
PRINTSPR003672.3E-7328344IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
MDEVVRRRTD SLALSAAGGH VAGVSHLVSA AGAGPGSPPP LEIGAASRCS ATHHGLENGS  60
GLNKSSSSQL PKVSHKTRSG FPCEERTGAE RQSDVLQRRY LQRFSHVMLL ALQFGRHHRP  120
STARCAAHSH RCCSVVVRVA AFPKTSSCLS WLVPLPEWDF VWLSMNGWRW IACETESLIL  180
SMDELGQHKS ENMPCRTTAL VGGAAATTAT PNSRPPRTPP WKNRKNHRKR AMRRANATTR  240
PADALRGQIN KQNASQRRGP RVRQTAKPVG VGPCPAAAEG RRGGRMPRAR PPPVPAAREA  300
GVEVKYRGVR RRPSGRYAAE IRDPARKTPI WLGTFDSAEA AARAYDAAAR SLRGAAARTN  360
FSASASAQVA APSPAIPP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-173053611471Ethylene-responsive transcription factor ERF096