PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc07460.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 378aa MW: 40696.3 Da PI: 11.8745 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.9 | 2.4e-18 | 305 | 355 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +gr++AeIrdp r + ++lg+f++ae Aa+a++aa+++l+g+ Zmw_sc07460.1.g00010.1.am.mk 305 KYRGVRRRP-SGRYAAEIRDP---A-RkTPIWLGTFDSAEAAARAYDAAARSLRGA 355 8********.7*********8...2.35*************************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 1.2E-11 | 305 | 354 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 9.85E-14 | 305 | 361 | No hit | No description |
SuperFamily | SSF54171 | 3.66E-20 | 305 | 363 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 7.9E-28 | 305 | 363 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 5.1E-31 | 305 | 368 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.628 | 305 | 362 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.3E-7 | 306 | 317 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.3E-7 | 328 | 344 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence Send to blast |
MDEVVRRRTD SLALSAAGGH VAGVSHLVSA AGAGPGSPPP LEIGAASRCS ATHHGLENGS 60 GLNKSSSSQL PKVSHKTRSG FPCEERTGAE RQSDVLQRRY LQRFSHVMLL ALQFGRHHRP 120 STARCAAHSH RCCSVVVRVA AFPKTSSCLS WLVPLPEWDF VWLSMNGWRW IACETESLIL 180 SMDELGQHKS ENMPCRTTAL VGGAAATTAT PNSRPPRTPP WKNRKNHRKR AMRRANATTR 240 PADALRGQIN KQNASQRRGP RVRQTAKPVG VGPCPAAAEG RRGGRMPRAR PPPVPAAREA 300 GVEVKYRGVR RRPSGRYAAE IRDPARKTPI WLGTFDSAEA AARAYDAAAR SLRGAAARTN 360 FSASASAQVA APSPAIPP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 7e-17 | 305 | 361 | 14 | 71 | Ethylene-responsive transcription factor ERF096 |