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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc07176.1.g00020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 217aa MW: 24036.6 Da PI: 9.8932 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 29.4 | 1.6e-09 | 197 | 217 | 1 | 21 |
---SS-EEEEEEE--TT-SS- CS WRKY 1 ldDgynWrKYGqKevkgsefp 21 ldDgy+WrKYGqK vk+s +p Zmw_sc07176.1.g00020.1.am.mk 197 LDDGYKWRKYGQKIVKNSLHP 217 59***************9887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.3E-11 | 182 | 217 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.57E-8 | 189 | 217 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.564 | 192 | 217 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.2E-6 | 198 | 217 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence Send to blast |
MERSSQLETC LPSLYGLSPC APPHRRLAPL PNDNKLLQMP LVHEQAGNHG VMLNSSDNDG 60 GLYPLLLPGI PFCPSSSASC DKPTGFAPLD AVEVNDDAPQ GVMLWRAPRQ RKPAAKSLVI 120 SRSQVATARV HGMPAARVQF LARWGLSVTD WAYTCGDGEN RWKGPATAAD KGRTMKVRRK 180 MREPRFCFQT RSDVDVLDDG YKWRKYGQKI VKNSLHP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025825009.1 | 3e-58 | probable WRKY transcription factor 12 | ||||
TrEMBL | A0A2T7CY44 | 1e-58 | A0A2T7CY44_9POAL; Uncharacterized protein | ||||
TrEMBL | A0A2T7CYF5 | 1e-58 | A0A2T7CYF5_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Gb01200.1.p | 1e-60 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1138 | 38 | 130 |