PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zmw_sc07051.1.g00030.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 263aa MW: 27776.1 Da PI: 10.4809

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc07051.1.g00030.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	99.7	1.8e-31	100	153	5	58
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrkn 58 ++cprC s+ntkfCyynnys sqPry+C+aCrr+Wt+GG+lr+vPvGggr+++ Zmw_sc07051.1.g00030.1.sm.mkhc 100 PRQCPRCGSANTKFCYYNNYSRSQPRYLCRACRRHWTEGGTLRDVPVGGGRKNR 153 679**********************************************97654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50884	26.021	101	155	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	9.7E-30	101	153	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	103	139	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	4.0E-17	107	146	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 263 aa Download sequence Send to blast
MHRASPWHSR CSKRAPFDDA LSAVSNKLPW PSPRRRDRHA VVLLSGRLSF LFRFGQGHGV 60 NSDVGGVPTS GVGDIVVSAA SSVAPPXXXX RHPPQPRPPP RQCPRCGSAN TKFCYYNNYS 120 RSQPRYLCRA CRRHWTEGGT LRDVPVGGGR KNRRGGRGGA AAKASSSSAP VLPLGAGNGS 180 ADVAFPDVLR QVLFQPVGSV SGAGYSIDLS SWQQMTAATA PPQGTGGDAN GALGLGGTST 240 MDAHCGALQY WSGWQQDDVP GLD

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001144294.1	9e-44	uncharacterized protein LOC100277177
TrEMBL	A0A0D3HF61	2e-46	A0A0D3HF61_9ORYZ; Uncharacterized protein
TrEMBL	A0A0E0R0W4	2e-46	A0A0E0R0W4_ORYRU; Uncharacterized protein
TrEMBL	A2Z8Y2	2e-46	A2Z8Y2_ORYSI; Uncharacterized protein
STRING	ORUFI10G15400.1	4e-47	(Oryza rufipogon)
STRING	OBART10G14440.1	4e-47	(Oryza barthii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367