PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc06792.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 527aa MW: 58130.5 Da PI: 6.0201

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc06792.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	40.3	9.6e-13	13	147	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeek....ewyfFskrdkkyatg 71 f F P+d lv + L++k++++++ + +++ d+++v P++L + + e ++yfFs+++ a+ Zmw_sc06792.1.g00040.1.sm.mk 13 FTFTPSDARLV-DSLRAKIANQEVAHAVYFRDDDVCSVRPEELVRrhgkparvnpR----EAgdgfQYYFFSTARFVGASR 88 89*******.77*****888566**********7445667654332....222235789999988888877 PP NAM 72 krknratk....sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++r+++ + +W+a + k+v + + L ++ + + +k W+m ey++ Zmw_sc06792.1.g00040.1.sm.mk 89 TKRSRIIEgtdkKETWHAETSLKQVEG--AVDGFMMVKLSYHVKIGEIVQKPGWLMTEYSF 147 77777644333478899999977..666778888988888899********86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	13.763	9	161	IPR003441	NAC domain
Pfam	PF02365	1.2E-7	13	146	IPR003441	NAC domain
SuperFamily	SSF101941	1.7E-14	13	161	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence Send to blast
MAALGAAADD DSFTFTPSDA RLVDSLRAKI ANQEVAHAVY FRDDDVCSVR PEELVRRHGK 60 PARVNPREAG DGFQYYFFST ARFVGASRTK RSRIIEGTDK KETWHAETSL KQVEGAVDGF 120 MMVKLSYHVK IGEIVQKPGW LMTEYSFKGA GDTVLCKIYK SPRGPGRSKA PSSSSAGKRK 180 AEDDLEGETS SMRQRHENVA APEFAEHVEE SQPEPQIAPA TFEFDGNITF TLEELTNFPT 240 GDVHTGFGVL TDGESIAAYA SGGTIDELIP STMEEVQPES EVPPASTDGS MTFEELWQLL 300 DTDVVDDGAY LQLPADEILA EEWLKDKETL QHVHIDRAAG DAMMFLQRSR PVNPRKRPPP 360 ALLSWSTPPR ASAPGPVPPT PRVAPPAASP HDPARAEPPP REATYALCRR CARRIAAAGP 420 RGEADRRAVP DRWLGFIFDT DTFVKKLVEV LSVPPFRLMD MIISLPDTVG IVSSPGAKRH 480 VKVPEDLDRF QATAEGAASC RRKQKDWRLQ TSFKAMKKGP STWTQTR

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence Send to blast

MAALGAAADD DSFTFTPSDA RLVDSLRAKI ANQEVAHAVY FRDDDVCSVR PEELVRRHGK  60
PARVNPREAG DGFQYYFFST ARFVGASRTK RSRIIEGTDK KETWHAETSL KQVEGAVDGF  120
MMVKLSYHVK IGEIVQKPGW LMTEYSFKGA GDTVLCKIYK SPRGPGRSKA PSSSSAGKRK  180
AEDDLEGETS SMRQRHENVA APEFAEHVEE SQPEPQIAPA TFEFDGNITF TLEELTNFPT  240
GDVHTGFGVL TDGESIAAYA SGGTIDELIP STMEEVQPES EVPPASTDGS MTFEELWQLL  300
DTDVVDDGAY LQLPADEILA EEWLKDKETL QHVHIDRAAG DAMMFLQRSR PVNPRKRPPP  360
ALLSWSTPPR ASAPGPVPPT PRVAPPAASP HDPARAEPPP REATYALCRR CARRIAAAGP  420
RGEADRRAVP DRWLGFIFDT DTFVKKLVEV LSVPPFRLMD MIISLPDTVG IVSSPGAKRH  480
VKVPEDLDRF QATAEGAASC RRKQKDWRLQ TSFKAMKKGP STWTQTR

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6280	15	45