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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc06690.1.g00030.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
HD-ZIP |
Protein Properties |
Length: 178aa MW: 20234.7 Da PI: 5.8963 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc06690.1.g00030.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 65.3 | 8.5e-21 | 77 | 130 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++t+eq++ Le+ Fe+++++ e+++eLA++lg+ rqV vWFqNrRa++k
Zmw_sc06690.1.g00030.1.am.mk 77 KKRRLTPEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWK 130
5678*************************************************9 PP
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2 | HD-ZIP_I/II | 133.2 | 9.7e-43 | 76 | 167 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLe 81
ekkrrl+ eqv++LE+sFeee+kLeperK+elar+Lg+ prqvavWFqnrRAR+ktkqlE++y++Lk+aydal+++++ L
Zmw_sc06690.1.g00030.1.am.mk 76 EKKRRLTPEQVQMLERSFEEENKLEPERKTELARRLGMAPRQVAVWFQNRRARWKTKQLETEYDRLKAAYDALAADHQGLL 156
69******************************************************************************* PP
HD-ZIP_I/II 82 keveeLreelk 92
+++ +Lr++++
Zmw_sc06690.1.g00030.1.am.mk 157 ADNGNLRAQVA 167
*******9986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 178 aa
Download sequence Send
to blast |
MDPGRMGFDS GGVRRGEGPQ MLLFGGGGSA NSNGFIRGVP MAVLGRDDDA RVGKRPFFTT 60 HEELMEEEYY DEQAPEKKRR LTPEQVQMLE RSFEEENKLE PERKTELARR LGMAPRQVAV 120 WFQNRRARWK TKQLETEYDR LKAAYDALAA DHQGLLADNG NLRAQVATSI YASSMCFE
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 124 | 132 | RRARWKTKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription activator that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. {ECO:0000269|PubMed:10732669}. |
UniProt | Probable transcription activator that binds to the DNA sequence 5'-CAAT[AT]ATTG-3'. {ECO:0000269|PubMed:10732669}. |